Candidatus Methylopumilus planktonicus: BN1208_1404
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Entry
BN1208_1404 CDS
T03869
Symbol
trmE
Name
(GenBank) GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbat03016
]
BN1208_1404 (trmE)
Transfer RNA biogenesis [BR:
mbat03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BN1208_1404 (trmE)
Prokaryotic type
Methyltransferases
BN1208_1404 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
RsgA_GTPase
Dynamin_N
Ras
MMR_HSR1_Xtn
GTP_EFTU
Guanylate_kin
Roc
Gtr1_RagA
MCM
ABC_tran
AAA_25
Arf
Motif
Other DBs
NCBI-ProteinID:
CEZ20284
UniProt:
A0A0D6EXU1
LinkDB
All DBs
Position
1:complement(1352673..1354031)
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AA seq
452 aa
AA seq
DB search
MQLANNLDTIAAIATPSGAGGIGVVRVSGSQARDVAKYLLGVCPENRLASYLPFLDRNGQ
VIDRGIALFFKSPHSYTGEDVLELQGHGGIAVMQLLLARCIECGARLAKPGEFTERAYLN
DKIDLTQAEAVADLINASTAEAAKSAMLSLSGYFSNKINDLLKELIDLRMYIEACLDFPE
EEIDFITTGKVKEKLLSLKLRMDEVTLSAKQGRLLREGFTVVLVGQPNVGKSSLLNQLSG
NDQAIVTSIPGTTRDPIKSEIQIDGIPIHVIDTAGLRDTNDEIEKMGIEKTWISIEKANI
ALFLVDAGKGITDYEKIILNRIPKDVFKVWVHNKIDLMSKKASSEIIEGEHHLFISAKNG
EGLAQLKNVLLKMAGVEFSKDGNQGIFMARQRHLDALDIVSKRLNESVNQIQSPELIAEE
LRQAQTSLASITGEFTPDDLLGEIFSRFCIGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgcaaataatttagacaccattgctgctattgctacaccctcgggtgctggc
ggcattggtgttgtgagagtttcaggatctcaagcgcgcgatgttgcgaaatatctttta
ggtgtttgccccgaaaatcgtttagcttcatacctgccgtttttggatcgtaatggccaa
gtaatagatcgcggcatcgcacttttttttaaatccccacactcgtataccggtgaagat
gttttagagcttcaaggccatggcggcattgctgtgatgcaacttttattggcgcgctgt
attgaatgtggtgcgagacttgcaaagcctggagagtttactgagcgcgcttatcttaat
gacaaaattgatttaactcaggcagaagctgttgcagatttaattaatgcttcaacagcc
gaggcagctaaaagtgctatgctttccctaagtggttatttttcgaataaaatcaatgac
ttacttaaagagcttattgatttacgtatgtatattgaagcctgtttagattttccagag
gaagaaatcgacttcattacgactggcaaagtaaaggaaaagcttttaagcctgaagctt
cgcatggatgaagtaactttatctgctaaacaaggacgcttattgcgtgaaggctttaca
gtggtgttggtgggtcaacccaatgtgggcaagtcgagtttgctcaatcaattatctgga
aatgatcaagccattgtgacttccattccaggcacaacgcgcgaccccattaaaagtgaa
attcaaattgatggtatccctattcatgtgattgatacagccgggttaagagataccaac
gatgaaattgaaaaaatgggtattgaaaaaacatggatttcgatagaaaaggccaatatc
gcattatttttagtagatgctggcaaaggtattaccgattacgagaaaatcattctaaat
cgcattccaaaagacgtttttaaggtgtgggttcacaataaaattgatttgatgtctaaa
aaagcatcatctgaaataattgaaggcgagcatcatctttttatctccgcaaaaaatgga
gaaggtttggcccaactcaagaatgttttattaaaaatggctggtgttgaatttagtaag
gatggcaaccaaggcatttttatggccagacaaagacatttagatgcgctcgatatagtc
tcaaaacgtttgaatgagtcagtgaatcagattcagtcgcctgaattgatagccgaagag
cttagacaagcgcaaacttcattggcttctattactggcgaatttaccccagacgatctc
ctgggggagatttttagccgtttttgtatcggcaagtaa
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