KEGG   Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2: BCG_3325
Entry
BCG_3325          CDS       T00463                                 
Symbol
lhr_1
Name
(GenBank) Probable ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mbb  Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
Brite
KEGG Orthology (KO) [BR:mbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbb03400]
    BCG_3325 (lhr_1)
Enzymes [BR:mbb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BCG_3325 (lhr_1)
    5.6.2.6  RNA 3'-5' helicase
     BCG_3325 (lhr_1)
DNA repair and recombination proteins [BR:mbb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BCG_3325 (lhr_1)
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_4th_Lhr WHD_2nd_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_22 AAA_25 PhoH Cas3-like_C_2 DUF6406 GST_C_2
Other DBs
NCBI-ProteinID: CAL73314
UniProt: A0A0G2Q9J5
LinkDB
Position
3629183..3633724
AA seq 1513 aa
MRFAQPSALSRFSALTRDWFTSTFAAPTAAQASAWAAIADGDNTLVIAPTGSGKTLAAFL
WALDSLAGSEPMSERPAATRVLYVSPLKALAVDVERNLRTPLAGLTRLAERQGLPAPQIR
VGVRSGDTPPALRRQLVSQPPDVLITTPESLFLMLTSAARQTLTGVQTVIIDEIHAIAAT
KRGAHLALSLERLDDLSSRRRAQRIGLSATVRPPEELARFLSGQSPTTIVAPPAAKTVEL
SVQVPVPDMANLTDNTIWPDVEARLVDLIESHNSTIVFANSRRLAERLTARLNEIHAARC
GIELAPDTNQQVAGGAPAHIMGSGQTFGAPPVLARAHHGSISKEQRAVVEEDLKRGQLKA
VVATSSLELGIDMGAVDLVIQVQAPPSVASGLQRIGRAGHQVGEISRGVLFPKHRTDLLG
CAVSVQRMLAGEIETMRVPANPLDILAQHTVAAAALEPLDADAWFDTVRRAAPFATLPRS
LFEATLDLLSGKYPSTEFAELRPRLVYDRDTGTLTARPGAQRLAVTSGGAIPDRGLFAVY
LATERPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLPFWRG
DDAGRPAELGAALGALTGELAALDRTAFGTRCAGLGFDDYATDNLWRLLDDQRTATAVVP
TDSTLLVERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLRDRYGIDEKPTASDNGIMV
RLPDTVSAGEDSPPGAELFVFDADEIDPIVTTEVAGSALFASRFRESAARALLLPRRHPG
RRSPLWQQRQRAARLLEVARKYPDFPIVLETVRECLQNVYDVPILVELMARIAQRRVRVA
EAETAKPSPFAASLLFGYVGAFMYEGDTPLAERRAAALALDGTLLAELLGRVELRELLDP
DVIAATSRQLQHLAADRVARDAEGVADLLRLLGPLTEDEIAARAGAPEVSGWLDGLRAAK
RALVVSFAGRSWWVAVEDMGRLRDGVGAAVPVGLPASFTEAVADPLGELLGRYARTHTPF
TTAAAAARFGLGLRVTADVLGRLASDGRLVRGEFVAAAEGSAGGEQWCDAEVLRILRRRS
LAALRAQAEPVSTAAYGRFLPAWQHVSAGNSGIDGLAAVIDQLAGVRIPASAIEPLVLAP
RIRDYSPAMLDELLASGDVTWSGAGSISGSDGWIALHPADSAPMTLAEPAEIDFTDAHRA
ILASLGTGGAYFFRQLTHDGLTEAELKAALWELIWAGRVTGDTFAPVRAVLGGAGTRKRA
APAHGGHRPPRLSRYRLTHAQARNADPTVAGRWSALPLPEPDSTLRAHYQAELLLNRHGV
LTKDAVAAEGVAGGFATLYKVLSAFEDAGRCQRGYFIESLGGAQFAVASTVDRLRSYLDG
VDPEQPDYHAVVLAAADPANPYGAALPWPASSADGTARPGRKAGALVVLVDGELAWFLER
GGRSLLTFTDDPEANHAAAIGLADLVTAGRVASILVERADGMPVLQPGGRASAALTALLA
AGFVRTPRGLRRR
NT seq 4542 nt   +upstreamnt  +downstreamnt
gtgaggttcgcgcagccttcagcactgagccgattcagcgcgctcacccgagactggttc
accagcactttcgccgcgcccaccgccgcccaggccagcgcctgggcggccatcgcagac
ggcgacaacacgctggtcatcgctcccaccggatccgggaagaccctggcggcgttcctg
tgggccctggatagcttggccggttcggaacctatgtccgagcggccggcggccacccgc
gtgctgtatgtgtcgccgctcaaagcgttggccgtcgacgtcgagcgcaacctgcgcact
ccgctggccggactgacccgactcgccgaacgccagggtctgcccgcgccccagatcagg
gtgggcgtccgttcgggcgacaccccgcccgcacttcgccgccagctcgtcagccagccg
cccgacgtgctgatcaccaccccggagtcattgtttttgatgctcacttcggccgcacgc
caaactctgaccggtgtgcagaccgtcatcatcgacgaaattcatgccatcgccgccacc
aagcgcggcgcacacctggcactatccctagaacggctcgacgacctgtctagccggcga
cgggcgcagcgcatcgggctgtcggcgaccgtacgtcctcccgaggaactcgcaaggttc
ctgtccggacagtccccgacgaccattgtggcgcccccggccgccaagaccgttgagctg
tccgtgcaggtgccggtgcccgacatggccaacttgaccgacaacaccatctggccggat
gtggaggctcggctggtcgacctgatcgaatcacacaactcgaccatcgtgttcgccaat
tcgcgacgattggccgagcgacttaccgcacggctcaacgaaattcacgccgcgcgctgc
gggattgagctcgcgccagacaccaaccagcaggttgccggcggcgccccggcgcacatc
atgggctcgggccagacgttcggagcgccgccggtgctggcccgcgcccaccatggctcg
atcagcaaggagcagcgcgccgttgtcgaagaggacctcaaacgcgggcaactcaaagcg
gtggtggcgacgtccagcctggagctgggcatcgacatgggcgcggtcgatctggtgatc
caagtacaggcaccaccatcggtggccagcgggctgcagcgcattggccgggccggtcat
caggtcggcgagatttcgcggggggtgctgtttcccaagcatcgcaccgacctactcggc
tgcgcggtcagcgtgcagcgcatgcttgccggtgagatcgagaccatgcgggtgccggcc
aacccactcgacattctggcccagcacacggtggcggcggctgcgctggaaccgttggat
gccgacgcgtggttcgacaccgtgcggcgggccgccccgttcgcgaccctgccgcgtagc
ctgttcgaggccaccctggacctgctgtccggcaagtacccatccaccgagttcgctgag
ctgcggccgcggctggtgtatgaccgcgataccggcacgctgaccgcgcgacccggagcc
cagcgactggccgtcacctccggcggcgccattcccgatcgcgggttgttcgccgtctac
ctcgctaccgagcggccgtcgcgggtaggcgaactcgacgaggaaatggtttacgagtcc
cgccccggtgacgtgatctcgctgggtgccaccagctggcgaatcaccgagatcacccac
gaccgggtgctggtgatccccgcgccgggccagccggcccgattgccgttctggcgcgga
gacgatgccggccgccccgccgagctcggcgccgcactcggcgccctcaccggcgagctg
gccgccctggaccgtacggcattcggcacacgttgtgcgggtttgggtttcgacgactat
gccaccgacaacctgtggcgactgctggacgaccaacgcaccgctaccgcagtggtaccc
accgacagcacattgttggtcgagcggtttcgtgacgagctgggcgattggcgggtgatc
ttgcattcgccgtatgggctgcgggtgcacggaccgctcgcgctcgcagtcggccggcgg
ctgcgcgaccgctatggcatcgacgagaagccgaccgcctccgacaacggcataatggtg
cgcctaccggacaccgtgtccgctggcgaagacagcccgccgggtgccgaactgttcgtt
ttcgacgccgacgagatcgacccgatcgtcaccaccgaagtggccggttcggcgctgttc
gcgtcacggttccgggaatcggcggcccgcgctctgctgctgccccgccggcaccccggc
cgccgctcgccgctgtggcagcagcggcagcgcgccgcccggctgttggaagtggcccgc
aaataccccgacttcccgattgtgctggagacggtccgcgagtgcctgcagaacgtctat
gacgtcccgatcttggtcgagctgatggcgcggatcgcccagcggcgggtgcgtgtcgcc
gaagccgagaccgccaaaccttcgccatttgcggcatcgctgttgttcggctacgtcggc
gccttcatgtacgagggcgatacgccgctggccgaacggcgcgccgccgcgctcgcgctg
gacggcacgttgctggccgagctgctaggccgggtggagctgcgcgagctgctcgatcct
gacgtcatcgccgctaccagccgccagctccagcatctggcggccgaccgggtagcccgt
gacgccgaaggggttgccgatctgctgcggctgctgggtccgctcaccgaagacgagatc
gctgcccgggcgggcgcgcccgaggtcagcggctggctggacggcttacgcgccgccaaa
cgcgcgctcgtggtgtccttcgccggccgcagctggtgggttgccgtcgaggacatgggc
cggctgcgcgacggcgttggcgcggcggttccggtggggctgccggccagcttcaccgag
gcggtagccgacccgctgggcgaactactgggccgctacgcacgcacccacacaccgttc
accaccgctgcggccgcagcccggttcggtcttgggctgcgggtgaccgccgacgtgctg
ggccggctggccagcgatggccggctggtgcgcggcgaattcgtggccgcggccgaagga
tccgccggcggcgagcagtggtgtgacgccgaggtgttgcgaattctgcggcgccgctcg
ctggccgcactgagggcgcaggcagagccggtcagcaccgccgcctacggacgcttcctg
ccggcctggcagcacgtttccgcgggcaactcgggcatcgacgggctggccgcggtcatc
gatcagctcgccggcgtccggataccggcctcggcgatcgaaccgctggtgcttgcccca
cggatccgcgattactcgccggcgatgctcgacgagctgctcgcgagcggggacgtcacc
tggtcgggcgccgggtcgatctcaggcagtgacggctggatcgccctgcaccccgccgac
tcggcgcccatgacgctggcggagccggccgagatcgacttcaccgacgcccaccgggcg
atcttagccagcctgggcactggcggcgcgtacttcttccgccagttgacccacgacggc
ctgaccgaggcggaactcaaagccgctctgtgggaattgatttgggccggacgagtgacc
ggcgacacgttcgcaccggtacgcgcggtactcggcggggcgggcacccggaagcgtgct
gctcccgcacacggcgggcatcgaccgccgcgcctgagccgataccgcctcacgcacgcc
caggcccgcaacgctgacccgaccgtcgccgggcggtggtccgcgctgccgcttcccgaa
ccggactccacgctgcgcgcccattaccaagccgagctgctgttgaaccgccacggcgtg
ttgaccaaagacgcagttgctgccgagggtgtggcgggcgggttcgcgacgctctacaag
gtgctcagtgcgttcgaggatgccggcaggtgccagcgtggctacttcatcgagtcgttg
gggggcgctcagttcgccgtcgcctcgaccgtagaccggctgcgtagctacctcgacggt
gtcgaccccgaacagccggactaccacgcggtggtgctggccgctgccgacccggccaac
ccgtatggggcggcgttgccctggccagcgtcgagcgctgacggtaccgcccggccgggc
cgcaaagccggcgcactggtcgttctggtggacggcgagttggcctggttcctcgagcgc
ggcgggcggtcgttgctgacgttcaccgatgatcccgaggccaaccacgcggcggccatc
gggctggccgacctggtcaccgccgggcgcgtcgcgtcgattctggtcgagcgggccgac
ggcatgccggtgctgcagcccggcgggcgggcgtcggcggcactgacggcgctgctggca
gccggcttcgtccgcacacctcgcggtctgcggcggcggtaa

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