Mesomycoplasma bovoculi: MYB_02080
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Entry
MYB_02080 CDS
T03034
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mbc
Mesomycoplasma bovoculi
Brite
KEGG Orthology (KO) [BR:
mbc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYB_02080 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbc03021
]
MYB_02080 (rpoD)
Transcription machinery [BR:
mbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYB_02080 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
DCD
Motif
Other DBs
NCBI-ProteinID:
AHH45420
UniProt:
W5UUG4
LinkDB
All DBs
Position
complement(548215..549975)
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AA seq
586 aa
AA seq
DB search
MSSKKTEKNLILKQEKETKKVKSKTTKASKEVKTSELSKKESKTKNSLSKVAKESKKKDS
KNTEIKAKVSKVETKKSKKEDTKTKVAKEKKVKVAKEKSSTDSSKKAKTSASKTTKSKTK
KIKTTKKSTINSESKTYDFLINELSKVLEKKKKKLLKSKEIKKNQKIFLTNDEVYLFLDK
KNLQIPEDEIDNMYSILIKSKILDKQADELDVADVELNELSKYSKSKPKKDKFQEDEDFQ
NFNEDEDFESFNEEDVDDDNMDESLLIQEPSKLDYLDEDSVSHRRTKIYSDDTYRNKLSD
TNDIIKWYMRWIGKYGKLLTPEEEQELTKKMQMPGRIGKKARDTLVQRNLRLVINNAKRY
KNRGLGFIDLISEGNLGIMKAVSKFDPSKGFKFSTYATWWIRQAITRAVADQARLVRIPV
HMVETINKINKIDRELQQETGLNPTAEEIAARLGGDFTAEKVQHIRRINIEPISLDKTIG
KEEDSSFSDFIKDESVISPVEYAEREERGKMLVNIIKENLDRDEQDFIFRRFGISEDENG
NQYKPHSFDEMAELRKVTKERIRQIETKILKKLKPLYRRWMHKDFF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaaaaaaacagaaaaaaatttaatattaaagcaagaaaaagaaacaaaaaaa
gttaaatcaaaaacaactaaagcaagtaaagaagttaaaacttctgagttaagcaaaaaa
gaatcaaaaacaaaaaatagtttgtctaaagttgccaaagaatctaaaaaaaaggattca
aaaaacactgaaataaaagcaaaagtgtcaaaagtagaaactaaaaaatctaaaaaagaa
gacactaaaactaaagttgccaaagaaaaaaaagtaaaagttgcaaaagaaaaatcttca
actgattcaagtaaaaaagcaaaaacaagtgcttcaaaaactacaaaatcaaaaacaaaa
aaaataaagacaacaaaaaaatcaacaataaattcagaatcaaaaacttatgatttttta
attaatgaactttctaaagttcttgaaaagaaaaaaaagaaattattaaaatctaaagaa
attaagaaaaatcaaaaaatttttttaacaaatgatgaagtttatttatttttagacaaa
aaaaatcttcaaattcctgaagatgaaattgacaatatgtattctattttgattaaaagt
aaaattttagataaacaagcagatgagttagatgttgctgatgttgaattaaacgagtta
tccaaatatagtaaatccaaacccaaaaaagataaatttcaagaagatgaagacttccaa
aattttaatgaagatgaagattttgagagttttaatgaagaagatgttgatgatgacaat
atggatgaaagtcttttaattcaagaaccaagcaaattagactatttagacgaagatagc
gtgagtcatagacgaacaaaaatttatagtgatgatacttatcgaaataaactttctgac
actaatgacattataaaatgatatatgcgttgaattgggaaatacggaaaattgctaacc
cctgaagaagagcaagagttgaccaaaaaaatgcaaatgccaggtcgaattggtaaaaaa
gctagagatacattggtacaacgtaatttgagacttgttatcaacaatgcaaaacgttat
aaaaatagaggtctaggttttattgacttaatttctgaaggaaacttaggaattatgaaa
gctgtatcaaaatttgatcctagcaaaggatttaaatttagtacatatgcaacttgatga
attcgtcaagcaatcactagagcagtggctgatcaagcaagattagttcgaattcctgtt
catatggttgaaactatcaataaaatcaacaaaatagatagagaattacaacaagaaaca
ggtctaaatcctacagctgaagaaattgctgcaagactaggtggtgattttacagctgaa
aaagttcaacatattcgtcgtattaatattgaacctatttctcttgataaaaccattggt
aaagaagaagatagctctttttcagatttcattaaagatgaaagtgtaatttctccagtt
gaatatgctgaacgcgaggaacgtggtaaaatgcttgtaaatattattaaagaaaattta
gaccgggacgagcaagattttatttttcgtcgttttggaattagtgaagatgaaaatggt
aatcaatataaaccacattcttttgatgaaatggcagagttgcgaaaagtaacaaaagag
agaattcgtcaaattgaaaccaaaattctcaaaaaactaaaacctttatatcgtcgttga
atgcacaaggactttttttaa
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