Melittangium boletus: MEBOL_000830
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Entry
MEBOL_000830 CDS
T05066
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mbd
Melittangium boletus
Pathway
mbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEBOL_000830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbd03021
]
MEBOL_000830
03019 Messenger RNA biogenesis [BR:
mbd03019
]
MEBOL_000830
Transcription machinery [BR:
mbd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MEBOL_000830
Messenger RNA biogenesis [BR:
mbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MEBOL_000830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
NACHT
AAA
ResIII
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ATB27392
UniProt:
A0A250I8B1
LinkDB
All DBs
Position
1024228..1025772
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AA seq
514 aa
AA seq
DB search
MSETDNRDPRELPSPAAARPEAPDLDEGDDEGDDGPDEGEGSAAPGQPAGAQPGPGGRRR
RRRRRRRGAQVHFTPEGQAYRLVAGPDGQQQQVFLTPQELQQYQQRQAQQQQQQQPAPGG
APHAPQHAPHPHGHHGGGQQRAQHVAPQPSLAPVEGVLDTEAKGPNAYLRQIKRNLLPSP
DDAEIPKNLVQKLRLRPGQYLNAFAQMKGQKGLVQRVEQVDGRPLEQMNRLPHFADLTSV
DPVERIKLENGHREMVTRVLDLISPIGKGQRALIVAPPKTGKTIMLQRIAQAVVANHPEM
HLMVLLIDERPEEVTDMRRSIKAEVLASSSDRPTGDHLKIAELALERARRLVESGKDVMI
LLDSITRLARAYNKEQDNSGRTLSGGVDSRALERPKRIFGAARATEEAGSLTIIGTALID
TGSRMDEVIFEEFKGTGNSEVTLDRFLSEKRIFPAINIGQSGTRKEEKLFTHKEYEKVKK
MRQMLFAVKPVEAMEALIKRLSRYTYNDEFLEEL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccgacaaccgcgatccccgagagctcccctcccccgcggccgcccgcccc
gaggcacccgacctggacgaaggcgacgacgagggcgatgacggccccgatgagggcgag
ggctcggccgcgccgggacaacccgcgggtgcccaaccgggcccgggtggccgccgccgc
cgccgccgccgccgccgtcggggtgcccaggtgcacttcaccccggaggggcaggcctac
cgcctggtcgccggtccggatggccagcagcagcaggtgtttctcacgccgcaggaattg
cagcagtaccagcagcgtcaggcgcaacagcagcagcagcaacagcccgccccgggcggc
gccccccatgccccccagcacgcgccgcacccgcacgggcaccatggcggcggccagcag
cgggcgcagcacgtggcgccccaaccctcgctcgctcccgtggagggcgtgctcgacacc
gaggccaagggccccaatgcctacctgcggcagatcaaacgcaacctcctgccctcgccc
gacgacgcggagatccccaagaacctggtgcagaagctgcgcctgcgcccgggccagtac
ctgaacgcgttcgcgcagatgaagggccagaagggcctcgtccagcgcgtggagcaggtg
gatggccgcccgttggagcagatgaaccgcctgccccatttcgcggacctcacgtccgtg
gacccggtggagcgcatcaagctggagaacggtcaccgggaaatggtgacgcgggtgttg
gatctcatctcgcccatcggcaagggccagcgcgcgctcatcgtcgccccgcccaagacg
ggcaagacgatcatgctccagcgcatcgcccaggcggtggtggccaaccacccggagatg
cacctcatggtgctgctcatcgacgagcgccccgaggaagtcacggacatgcgccgcagc
atcaaggcggaggtgctggcgtccagctcggaccggcccacgggcgatcacctgaagatc
gccgagctggcgctcgagcgggcgcggcgtctggtggagagcggcaaggacgtgatgatc
ctcctggactccatcacgcggctggcgcgcgcgtacaacaaggagcaggacaactcgggc
cggacgctgtcgggcggcgtggacagccgcgcgctcgagcgccccaagcgcatcttcggc
gcggcgcgcgccaccgaggaggccggcagcctcaccatcatcggcacggcgctcatcgac
accggcagccgcatggacgaggtcatcttcgaggagttcaagggcaccggtaactccgag
gtgacgttggaccggttcctctcggagaagcgcatcttcccggccatcaacatcggccag
tccggcacgcgcaaggaagagaagctcttcacccacaaggagtacgagaaggtgaagaag
atgcgtcagatgctcttcgcggtgaagccggtggaggccatggaagcgctcatcaagcgc
ctgagccgctacacctacaacgacgagttcctcgaggagttgtaa
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