Melittangium boletus: MEBOL_003461
Help
Entry
MEBOL_003461 CDS
T05066
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mbd
Melittangium boletus
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbd03016
]
MEBOL_003461
Enzymes [BR:
mbd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MEBOL_003461
Transfer RNA biogenesis [BR:
mbd03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MEBOL_003461
Prokaryotic type
tRNA splicing ligases
MEBOL_003461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ATB30006
UniProt:
A0A250IGD7
LinkDB
All DBs
Position
complement(4118794..4120146)
Genome browser
AA seq
450 aa
AA seq
DB search
MSWTQRLEKVADGHYVLPKTKTMRVDAHLFLSDKLLLGEGPGLPGLEEAVFQQVVNAASF
PGVTRVAVTPDCHVGYGVPIGTVVETEGVLLPTAAGYDIGCGMVQLQTSLTAADVADPSK
RRKWIDAVTKRIAVGVGASRVQHQRKVDARTFAEVVRHGAQALGRHGSITERDFLPVEDD
RVDIPPRAYEKREQLGSLGGGNHFTEMQVDESGRVWVMLHTGSRGFGWNIAKHYFVEGAA
ALGLGRHSEDFIWLDAGGRLGREYWNLHNMAANFAVANRLLIAEAVCAALEEVFGGTASV
YYEISHNLIQKEAGRFVARKGATRAFPGGHPSLKGTPWASSGHPILIPGSMETGSAILFA
EPGAERSIYSVNHGAGRRLSRGEARRVLDQGETDERMKEAGILLNTRTTPIDESGPCYKN
LDDVLDTVEMAGLAKVARRLKPVACIKGAD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagctggacacaacggttggagaaggtcgcggacgggcactacgtcctgcccaagacg
aagacgatgcgggtggatgcccacctgttcctctcggacaagctgctgctgggcgagggc
cccggcctgcccggcctcgaggaggccgtcttccagcaggtcgtcaacgccgcctccttc
ccgggcgtcacccgggtggccgtgacgcccgactgccatgtgggctacggcgtccccatt
ggcaccgtcgtggagaccgagggcgtgctcctgcccaccgcggcgggctacgacatcggc
tgcggcatggtgcagttgcagacgagcctcaccgccgccgacgtggcggacccctccaag
cgccgcaagtggatcgacgcggtgacgaagcgcatcgccgtgggcgtgggggcctcgcgg
gtgcagcaccagcgcaaggtggacgcgcgcaccttcgcggaagtggtgcgccatggcgcc
caggcgctcggccgccacggctccatcaccgagcgcgacttcctccccgtggaggatgac
cgggtggacatccccccacgcgcctacgagaagcgcgagcaactgggcagcctcgggggt
ggcaaccacttcaccgagatgcaggtggatgagtccggccgcgtctgggtgatgctgcac
accggcagccggggcttcggctggaacatcgccaagcactacttcgtcgagggcgcggcg
gcgctcgggctcggccggcacagcgaggacttcatctggctcgacgcgggaggacgactc
gggcgcgagtactggaacctgcacaacatggcggccaacttcgccgtggccaaccggttg
ctcatcgccgaggccgtgtgcgccgcgctcgaggaggtcttcggcggcacggcgagcgtc
tattacgagatctcccacaacctcatccagaaggaggcgggcaggttcgtggcgcgcaag
ggggccacgcgggccttccctggcgggcacccctcgctcaagggcacgccctgggcctcc
tcgggccaccccatcctcattcccggctccatggagacgggcagcgccatcctcttcgcc
gagcccggtgccgagcgctccatctactcggtgaaccacggcgccggacggcggctgtcg
cgcggcgaggcccggcgggtgctcgatcagggcgagaccgacgagcgcatgaaggaggcc
ggcatcctcctcaacacgcgcaccacgcccatcgacgagtcggggccctgctacaagaac
ctggacgacgtgctggacaccgtggagatggcgggtctggccaaggtggcccggcgcctc
aagccggtggcctgcatcaagggcgcggactag
DBGET
integrated database retrieval system
