Melittangium boletus: MEBOL_004490
Help
Entry
MEBOL_004490 CDS
T05066
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mbd
Melittangium boletus
Pathway
mbd02020
Two-component system
mbd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MEBOL_004490
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MEBOL_004490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbd03021
]
MEBOL_004490
Transcription machinery [BR:
mbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MEBOL_004490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
DUF7645
LacI
Motif
Other DBs
NCBI-ProteinID:
ATB31028
UniProt:
A0A250IIC7
LinkDB
All DBs
Position
5385003..5386514
Genome browser
AA seq
503 aa
AA seq
DB search
MAMELKQSLKLSQQLVMTPQLQQAIKLLQLSRMELLEQVREEMDQNPLLEQPDETPFGDL
SDKEPGEASHEAANTEIPRDLEARTPDTATEFKADKDGPPEIDWEAYLNSYQFNEPTTAS
NKGNVATDDMPSFEANMVEKEDLADHLQEQLGTLRLNEAERRIGMLILGNLDNDGYLKLE
DVEGDPLIRLANEADVSMSLAERTLRRIQNLEPKGCAARDLHECLLIQVAALKDKHAPLL
GLIIKRHMKYLESKNLPAIAKDLKVTLEEVVEASKLLPKLDPKPGRNFSGDDAQFITPDV
FIYKMEDDYTVVLNDDGLSKLRISGMYRNALKNGGVGPGQTKEFIQEKLRSAQWLIRSIH
QRQRTIYKVTESIVKFQREFLDLGIAHLKPLILRDVAEDIGMHESTVSRVTTNKYVHTPQ
GIFELKYFFNSSIARVSGEDTASEAVKHHIKQLVSQEDPRNPYSDQKIVELLKAQGTEIA
RRTVAKYREVLNILPSSKRKKYF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaactcaagcagagcctgaagctttcgcagcagctggtgatgacgccccag
ctgcagcaggccatcaagctgctgcaactctcgcggatggagctgttggagcaggtgcgg
gaggagatggatcagaaccccctgctcgagcagccggacgagacccccttcggcgacctg
tccgacaaggagccgggcgaggcctctcacgaggcggcgaacacggagattccgagggat
ctggaagcgcgcaccccggacacggccacggagttcaaggccgacaaggacggtccgccg
gaaatcgactgggaggcgtacctcaacagctaccagttcaacgagccgaccacggcgtcc
aacaagggcaacgtggccacggacgacatgccgtccttcgaagccaacatggtggagaag
gaggacctggcggaccacctccaggagcagctgggcacgctgcggctcaacgaggccgag
cgccgcatcggcatgctcatcctcggcaacctggacaatgacggctacctcaagctggag
gacgtggagggggatcccctcatccgtctggccaacgaggcggacgtgtccatgagcctg
gccgagcgcacgctgcgccgcatccagaacctggagcccaagggctgcgccgcgcgggat
ctgcacgagtgcctgctcatccaggtggccgcgctcaaggacaagcacgcgccgctcctg
ggcctcatcatcaagcggcacatgaagtacctggagagcaagaacctgccggcgatcgcc
aaggatttgaaggtgacgctcgaggaggtggtggaggcctccaagctgctgcccaagctg
gatcccaagccgggccgcaacttcagcggcgacgacgctcagttcatcaccccggacgtc
ttcatctacaagatggaggacgactacacggtggtgctcaacgacgacggtctgtccaag
ctgcgcatctccggcatgtaccgcaacgcgctcaagaatggcggcgtgggccccgggcag
accaaggagttcatccaggagaagctgcgcagcgcccagtggctcatccgctccatccac
cagcgccagcgcaccatctacaaggtcaccgagagcatcgtgaagttccagcgcgagttc
ctggacctgggcatcgcccacctcaagccgctcatcctccgggacgtggccgaggacatc
ggcatgcacgagtccaccgtgtcgcgcgtgacgacgaacaagtacgtgcacacgccccag
ggcatcttcgagctcaagtacttcttcaactcgtccatcgcccgcgtgtccggagaggac
accgccagcgaggccgtgaagcaccacatcaagcagctcgtgtcgcaggaagacccgcgc
aacccgtactcggatcagaagatcgtcgagctgctcaaggcccagggcacggagatcgcc
cggcgcacggtggccaagtaccgggaagtgctcaacatcctgccgagcagcaagcgcaag
aagtacttctag
DBGET
integrated database retrieval system