Melittangium boletus: MEBOL_005264
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Entry
MEBOL_005264 CDS
T05066
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mbd
Melittangium boletus
Pathway
mbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEBOL_005264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbd03019
]
MEBOL_005264
Enzymes [BR:
mbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MEBOL_005264
Messenger RNA biogenesis [BR:
mbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MEBOL_005264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
P-loop_SecA
HEM4
Motif
Other DBs
NCBI-ProteinID:
ATB31795
UniProt:
A0A250IJ57
LinkDB
All DBs
Position
complement(6333720..6335195)
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AA seq
491 aa
AA seq
DB search
MTFEDLKLAEPLLRAVKAEGYTSPTPIQQQAIPHVLEGKDVLGCAQTGTGKTAAFTLPIL
QRLSVGRPSPPARGRPIRALVLSPTRELAAQIGDSVKAYGRHTGLTSAVIFGGVGQSAQE
QALKSGVDILVATPGRLLDLMSQGFVSYKSLEVFVLDEADRMLDMGFIHDVKRVIAALPR
QKQTLFFSATMPPEIQGLANSILVKPVRVEVAPVATTAETIDQRLYFVEKEQKRGLLVHL
LQSDTGIQRALVFTRTKHGANRVARHLEAAGIGAEPIHGNKSQNARERALAAFKSGACRV
LVATDIAARGIDIDGISHVINFDLPNVPETYVHRIGRTGRAGAAGIALSFCDGEERAYLK
DIERTIRRRVPVVEAGPYRVAPAPASERDERPERRPQNEGRHAPRQARPQSSGGNPRGGN
PPRGESRGGGRGGEGNGGRRRQGGRDGRSAAPRGQDSRPSRNDRPSGSQAPASAPAAPAA
ASQRPRAPKWL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgaagatctgaagctcgccgaacccctgctgcgcgccgtgaaggccgagggg
tacacctcgcccacgcccatccagcagcaggccattccccacgtgctcgagggcaaggac
gtcctgggctgcgcgcagacgggcaccggcaagacggcggcgttcaccctgcccatcctc
cagcggctgtccgtgggccgtccctcgccgcccgcgcgcggccgtcccatccgcgcgctc
gtgctcagccccacgcgcgagctcgccgcgcagattggcgacagcgtcaaggcctacggg
cgccacaccggcctcacctccgccgtcatcttcggcggcgtgggccagagcgcccaggag
caggcgctcaagagcggcgtggacatcctcgtggccactccgggccgcctgttggatctg
atgagccagggcttcgtgtcctacaagtcgctcgaggtgttcgtcctcgacgaggcggac
cggatgctggacatgggcttcatccatgacgtcaagcgcgtcatcgccgccctgccccgc
cagaagcagacgctgttcttctcggccaccatgccgccggagatccagggcctggccaac
agcatcctggtcaagcccgtgcgcgtggaagtggccccggtggccaccacggcggagacc
atcgatcagcgcctgtacttcgtggagaaggagcagaagcgcgggctgctcgtgcacctg
ctccagagcgacacgggcatccagcgcgcgctcgtgttcacgcgcaccaagcacggcgcc
aaccgcgtggcccggcacctggaggccgcgggcatcggcgccgagcccatccacggcaac
aagagccagaacgcgcgcgagcgggccctggcggccttcaagtccggcgcctgccgggtg
ctggtggccacggacatcgccgcgcggggcatcgacatcgacggcatctcgcacgtcatc
aacttcgatctgcccaacgtgcccgagacgtacgtgcaccgcatcggccgcacgggccgc
gcgggcgccgcgggcatcgccctgtccttctgcgacggcgaggagcgcgcgtatttgaag
gacatcgagcgcaccatccgccggcgcgtgccggtggtggaggccggtccctaccgcgtc
gcgcccgctcccgcctccgagcgggacgagcgccccgagcgccgtccccagaacgagggc
cggcatgccccgcggcaggcccgtccccagtcctcgggaggcaacccgcgtggcggcaac
ccgccccggggcgagtcgcgcggaggcggacggggcggtgagggcaacggcggccgccgc
cgccagggaggccgggacggccggtccgccgccccccgggggcaggactcgcgcccctcc
cgcaacgaccggccctcgggaagccaggccccggcgtccgctccggcggctccggccgcc
gcttctcagcggcctcgcgcccccaagtggttgtaa
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