Melittangium boletus: MEBOL_007386
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Entry
MEBOL_007386 CDS
T05066
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mbd
Melittangium boletus
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbd03019
]
MEBOL_007386
Enzymes [BR:
mbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MEBOL_007386
Messenger RNA biogenesis [BR:
mbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MEBOL_007386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
T2SSE
AAA_30
AAA_25
nSTAND3
NACHT
Zeta_toxin
FtsK_SpoIIIE
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ATB33885
UniProt:
A0A250IQ57
LinkDB
All DBs
Position
8989552..8993262
Genome browser
AA seq
1236 aa
AA seq
DB search
MSGDLPIPPTGGLPTLHFPPELPISSRVEDITAAITAHQVVIVAGATGSGKTTQLPKVLL
AMGRGRPRQIGVTQPRRIAATSVAARVARELGTELGTDVGYQIRFEDRSSRRTAVKFMTD
GVLLAQIHSDPLLRRYDTVVLDEAHERSLTIDFLLGWLKRILPRRPDLKVVVSSATIETE
RFSRFFGGAPVIQVEGRTFPVDVLYEPPPEDAELADSVADAVADVLSLDPDGDILVFLPG
EREIREAENALNARELRGTVVQPLYARLSAAEQSRVFATLPQRRVILATNVAETSVTLPG
IVYVVDTGVARLSRYDPRSGTTRLHIEPVSQASADQRKGRCGRVREGICVRLYDEASFTT
RPAFTDPEIKRTGLAGVILRMKSLGLGDVEDFPFLDPPQPRAIAEGWRVLEELGAIEGKE
RTLTPLGNQLARFPVDPRIARMILAGAEYGCLDEVLIVAAALNLQDPRERPRELAQKADE
LHRRFRDEHSDFTGLLKLWEFVREAEGRGTSHLRRVCRDNFLSFPRVREWRDVQRQLEET
VRELRLPRKGRGAPSRGDALHQALLTGLMSRIGQWNPEQRHYTGAKQTRFMVHPSSALAK
KPPAWVMAFELVETSQLFARTVAKLDPEWLAAAAPHLLKRSYSEPHWSEKSARAVVKENA
TLFGLQVFKERPVSLASMDPARARLMFLEHALVRGEYRTRGAFQEKNRQVLERVARLRDK
ARRGELLDSEALLTFFDQRLPADVTDGASFEAWRRKAEAADPDVLVLSMEDALAHDPDLS
PAHYPDAITLHGASVPVTYTFDPAAEDDGITLSVPLLLLAPLVPGELDWTIPGRQREKLT
ALLEQLPRAQRKQLGPVPDLVDRLEKELVPFRGPMIPALARAVSRLCGVDVPEESLRADA
VAPYLRLTLRVLDERGKELARSRDADALIEQYGGRARAALRSAAPTSDWDRKGLTAWTFG
ELPPVVTRRVGGLEVRGYPALVDRGAAVDLVLLETSSAADAATRTGVRRLLMLAARGHVA
VSAARMPPPFPSLDGAPPARGQADAFRALVLARSVDDAFELAPGAPLPRTQAAFEALIRE
GSPRIERAARDWADAVAATSWELAATLGALKAASKGPSGAAAVRDIRSQLGHLFPANLIE
WIPFVHLLNYPRYLRAAQARLSRAVANPGKDAGKSAPFTPLWETFLARRATVRDQETARE
LRWAFEELRVAIFAPEVTTPVSVTVTKVGAALAALR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacttacccattccgcccaccggcggcttgcccaccctgcacttccccccc
gaactccccatctcgagccgggtggaggacatcaccgcggccatcaccgcccatcaggtg
gtcattgtcgcgggggccaccggctcggggaagacgacgcagctgccgaaagtcctgctc
gccatggggcgcggccgcccgcgccagattggcgtcacccagccccggcgtatcgccgcg
acgagcgtggcggcgcgcgtggcacgcgagctcggcacggagctgggcacggacgtcggc
taccagattcgcttcgaggaccgctcgtcccggcggacggccgtgaagttcatgaccgac
ggggtcctgctcgcgcagattcacagcgacccgctcctgcgccgctacgacacggtcgtg
ctcgacgaggcccacgagcgcagcctcaccatcgactttctgctcgggtggctcaagcgc
atcctccccaggcgccccgacctcaaggtggtggtgagctcggccaccatcgagaccgag
cgcttctcgcggttcttcgggggggctccggtcatccaggtggagggccggaccttcccg
gtggacgtgctctacgagccgccccccgaggacgccgagctcgccgactccgtcgccgat
gcggtggcggacgtgctctcgctcgacccggacggggacatcctcgtgttcctccccggg
gagcgggaaatccgcgaggccgagaatgccctgaacgcacgcgagctccgcggcacggtg
gtgcagcccctgtatgcgcgcctgtcggccgccgagcagtcgcgcgtcttcgccaccctc
ccccagcgccgggtcatcctcgccaccaacgtcgcggagacgtcggtcaccctcccggga
atcgtgtacgtcgtggacacgggggtggcgcgcctgtcgcgctacgacccgcgctcgggc
accacccgcctgcacatcgagccggtctcccaggccagcgccgaccagcgcaaagggcgc
tgcggccgcgtgcgcgagggaatctgcgtgcgcctctacgacgaggcgagcttcaccacg
cggcccgccttcaccgacccggaaatcaagcgcaccgggctcgcgggggtcatcctgcgg
atgaagtccctcggcctcggtgacgtcgaggacttccccttcctcgacccgccccagccg
agggccatcgccgagggctggcgggtgctcgaggagctcggggccatcgagggcaaggag
cgcaccttgacgccgctcgggaaccagctcgcgcgcttcccggtggacccgcgcatcgcg
cggatgattctcgccggcgccgagtacgggtgcctggacgaggtgctcatcgtcgccgcg
gcgctcaacctgcaggacccgcgcgagcggccacgggagctcgcgcagaaggcggacgag
ctgcaccggcgcttccgtgacgagcactcggacttcacggggctcctcaagctgtgggag
ttcgtgcgcgaggccgagggccgggggacgtcccatctgcggcgcgtgtgccgggacaac
ttcctgtccttcccgcgggtgcgcgagtggcgggacgtccagcgccagctcgaggagacc
gtccgcgagctgcgcctgccgcgcaagggccggggcgctccgtcgcgcggggacgccctg
caccaggcgctcctcaccgggctcatgtcccgcatcggccagtggaatccggagcagcgc
cactatacgggcgcgaagcagacgcgcttcatggttcacccctcgtcggcgctcgcgaaa
aagccccccgcctgggtgatggcgttcgagctcgtggagacgtcccagctgttcgcgcgc
accgtggcgaagctcgacccggagtggctcgcggcggcggccccccacctgctcaagcgc
agctactccgagccgcactggtcggagaagtccgcgcgcgccgtggtgaaggagaacgcg
accctcttcgggcttcaggtcttcaaggagcgccccgtgtccctggccagcatggacccc
gcgcgggcacggctgatgttcctcgagcatgccctggtgcgcggcgagtaccgcacccgg
ggggcgttccaggagaagaaccgccaggtgctcgagcgcgtggcacgcctgcgggacaag
gcccggcgcggcgagctgctcgacagcgaggcgctgctgacgttcttcgaccagcgcctc
ccggcggacgtgacggacggagcgagcttcgaggcctggcgccgcaaggccgaggcggcc
gaccccgacgtgctcgtcctctcgatggaggatgccctcgcgcacgacccggacctgtcc
ccggcgcactacccggacgccatcaccctgcacggcgcgtccgtgccggtgacgtacacc
ttcgaccccgcggccgaggacgacggcatcaccctgagcgtgccgctgctgctgctcgca
ccgttggtcccgggtgagctcgactggaccatccccgggcggcagcgggagaaactcacc
gccctgctcgagcagctcccccgcgcccagcgcaagcaactggggccggtgccggacctg
gtcgaccgtctcgagaaggagctggtgccctttcgcgggccgatgattccagcgctcgcg
cgtgcggtgtcccggctgtgcggcgtggacgtgcccgaggaatctctccgggcggatgcc
gtggcgccgtacctgcgcctcacgctccgggtgctcgacgagcggggaaaggagctcgcg
cggagccgcgacgccgatgcgctgatcgagcaatacgggggacgtgcacgggcggcgctg
cgcagcgcggcaccgacttcggactgggatcgcaaggggctgacggcctggaccttcggc
gagctgccccccgtggtcacccggcgggtcggcgggctcgaggtccgcggctaccccgcg
ctcgtcgaccggggcgccgccgtggacctggtgctgctcgagacctcctccgccgccgac
gcggccacgcgcacgggggtccgccggctcctgatgctcgccgcgcgcggacacgtggcc
gtcagcgccgcgcgcatgccgccgcccttcccgtccctggacggcgcgccgcccgcccgg
ggccaggccgacgccttccgggcgctcgtcctcgcccgcagcgtcgacgatgcgttcgag
ctcgcacccggtgcgccgctgccccgcacgcaggcggccttcgaggcgctgatccgtgag
ggctcaccgcgcatcgagcgtgcggcccgggactgggcggacgccgtcgccgccacctcc
tgggagctcgccgcgacgctcggtgcactcaaggcggcatcaaaggggccgagcggcgcg
gcggccgtgcgggacatccgctcgcagctcgggcacctgttccccgcgaacctcatcgag
tggattcccttcgtgcacctgctgaactacccgcgctacctccgcgcggcccaggcacgg
ctgtcgcgtgcggtggcgaaccccggcaaggacgcggggaagtccgcgcccttcaccccc
ctgtgggagaccttcctcgccaggcgcgccaccgtgcgtgaccaggagacggcgcgggag
ctgcggtgggccttcgaggagctccgcgtggccatcttcgctccggaggtgacgacgccc
gtgtcggtgacggtgacgaaggtcggcgcggccctcgcggcgctgcgctag
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