Melittangium boletus: MEBOL_007658
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Entry
MEBOL_007658 CDS
T05066
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mbd
Melittangium boletus
Pathway
mbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEBOL_007658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbd03019
]
MEBOL_007658
Enzymes [BR:
mbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MEBOL_007658
Messenger RNA biogenesis [BR:
mbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MEBOL_007658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ATB34157
UniProt:
A0A250ISJ2
LinkDB
All DBs
Position
9375565..9377031
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AA seq
488 aa
AA seq
DB search
MRRARFASPTPIQAQAIPPALAGRDVIGCAVTGTGKTAAYLLPLVERVASGPGPTGLVLA
PTRELVQQIAGEAAFFGAPRGITQAVVIGGTDMAAQIEAVRQKPSLVLATPGRLADLLKT
GAVNLSAVRMLVLDEADRMLEMGFTPELEQVLAALPRERQTLLFSATLSHNVTRFAQETL
RKPVRVEVTPSGTPAARAAQRVYEVSSEEKYPLLITLLGRDQLSTLVFTRTRERAEKVQD
YLKRAGHKTATIHADRTQGQRRQALEGFRRGQYRCLVATDIASRGLDVDDIGHVINFDLP
HSPEDYVHRIGRTARAGASGRASSFITERDEETVSAIERITRMRLPRVEVPREDAAFRAA
LAAFRARSEDEELLDALDAPRTAPRTAPRTPARPAPRPSGEGKETRGGKPPRREATGRGG
AQAHGTRRPKGKEDRREDRREKATPRGKSPGPSRSGPRGAKRPGGKAGGRKTGPSRGAGA
PSRGRRGR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgtgcccgcttcgcctcccctacccccatccaagcccaggccatcccgcccgcg
ctcgccggacgcgacgtcatcggctgcgccgtcacgggcacgggcaagaccgccgcctac
ctcctgcccctggtcgagcgggtggccagcggccccggtcccaccgggctggtgctcgcg
cccacgcgggagctggtccagcagatcgccggagaggccgccttcttcggagcgccgcgc
ggcatcacccaggcggtggtcatcggcggcacggacatggcggcccagatagaggcggtc
cggcagaagccctccctggtgctcgccaccccgggccggctggcggatctgctcaagacg
ggcgcggtgaacctctcggccgtgcgcatgctcgtgctggacgaggcggaccggatgctg
gagatgggcttcacgcccgagttggagcaggtgctcgccgcccttccccgcgagcgtcag
acgctcctgttctccgccaccctcagccacaacgtgacccgcttcgcccaggagacgctg
cgcaagcccgtccgggtggaagtcacaccgagcggaacccccgccgcgcgcgccgctcaa
cgggtgtacgaggtcagctcggaggagaagtatcccctgctgatcacgctgctcggccgg
gatcaactgagcacgctggtcttcacccgcacccgggagcgcgccgagaaggtgcaggac
tacctcaagcgcgcgggccacaagacggccaccatccacgccgaccgcacccagggacag
cgccgtcaggcgctcgagggcttccggcggggccagtaccggtgcctggtggccaccgac
atcgcctcacgcggactggacgtggatgacatcggtcacgtcatcaacttcgacctgccc
cactccccggaggactacgtgcaccggatcggccgcacggcgcgagcgggcgcgagcgga
cgcgcctcgtccttcatcaccgagcgggacgaggagacggtgagcgccatcgagcgcatc
acccggatgcgcctgccgcgcgtggaggtgccgcgcgaggatgccgccttccgcgcggcg
ctcgcggccttccgggcccgaagcgaggacgaggagttgctggacgcgctggacgcccca
cggactgccccacggactgccccacggaccccggcgcgtcccgctccccgcccgagcggc
gaggggaaggagacacgtggaggaaagcctccccgccgtgaggccacgggccgtggcggc
gcccaggcacacgggacgcgccgccccaagggcaaggaagacaggcgcgaagacaggcgc
gagaaggcaacgccgcgaggaaagtcccccggtccgagccggagtggaccccggggcgcc
aagcgtcccggaggaaaggcgggcggacgcaagacaggtccttcccgtggcgcgggagcc
ccctcgcgaggccggcgcggccggtag
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