KEGG   Drepanopeziza brunnea: MBM_00102
Entry
MBM_00102         CDS       T03105                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MBM_00102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mbe03041]
    MBM_00102
Spliceosome [BR:mbe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    MBM_00102
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I WD40_Gbeta WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd PRP4 NBCH_WD40 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_EML Beta-prop_HPS5 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_EIPR1 WDR54 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Tricorn_2nd
Other DBs
NCBI-GeneID: 18756037
NCBI-ProteinID: XP_007287991
UniProt: K1Y726
LinkDB
Position
Unknown
AA seq 560 aa
MHPSRMAYVEEPEPEVSRPLQKSPMSTPQAPKRYSYDRRGVSACARRKPAADGSGDNFQD
TGIDLTNVPLDNDYDMPSAGPGLAPERASAFQSQIDRRKKAAAIAVPTDDKRVRERLRQL
GEPVTEFGEGPGDRRDRLRELLADLAREDGGQDGEGDSKMVDAGDEDDDAPDEEFYTKGI
PELVVARKAIARYSLPRARSRLASQKAESTIPLRTHVKFRKEIKAKLEKFELQGSQTAGD
RPVSITRFAPNGEIIAAGNWGGGIKLLNVPDLNEIKTLRGHTDRIGGISWFPDATLPGTT
VSENSINLASGGAEGKVHLWSMTQDTPISTLEGHNQRVCRVEFHPSGKFLASASEDTTWR
LWDVETTTELLLQEGHSRGVFAIAFNTDGSLLASAGTDSIGRIWDLRTGRTVMILEGHIK
PIYALDWGVDGHRVLSGSEDGWIKCWDVRKVQPSGGIGAHKMVSDLRWFKGNDDPARGFI
PQLDEQGTQIPKKSGTFVVSSGFDKTVKIFSADDWSQVQSLTGHTGNIHSVDVTRDAKWI
VSGGYDRTVKLWGRNDGEGI
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgcatccctcgcgtatggcgtacgtggaggagccagaaccagaggtaagccgacccctc
cagaaatcccccatgtccacaccccaagctccgaaacggtattcatatgatcgcagaggt
gtctccgcgtgcgcacgtaggaaacctgcagctgatggatctggtgacaactttcaggac
accgggattgatcttaccaatgtgccccttgacaatgactatgatatgccctcggcaggg
ccgggcctggcccccgagcgcgcatcggcgtttcagtcgcagattgatcggaggaagaag
gcggctgctattgcggtgccgacagacgacaaaagggtgagagagcggctacgacagctg
ggggagcccgtcacggagtttggagaggggcctggggatcgtagggatagattgagggag
ctgctggcagatttggctagggaagatgggggacaagatggcgagggcgattcgaagatg
gtggatgcgggcgacgaggacgacgatgcgcctgacgaggaattttataccaaggggatt
ccggagttggtggtggcgcggaaggctattgcgagatactctttgccgagggcgaggagt
agactggcgagtcagaaggccgaatctacgattccgttgcggacacacgtcaagtttagg
aaggagatcaaggcgaagctcgaaaagttcgaacttcagggcagtcagacagcgggggat
cgaccagttagcatcacgcggtttgcgccgaatggggagatcattgctgctggaaattgg
ggaggcggaatcaagttgctgaacgttccggacttgaatgagatcaagacgctaagaggg
catacggatcgaatcggtggcatttcttggtttcctgatgcgacattacctggtacaacg
gtctcggagaactctatcaatcttgcctcgggtggtgcagaaggcaaagtccatctctgg
tcaatgactcaggacactcccatctcaacactcgaaggtcacaatcagcgagtgtgccga
gtagaatttcatccctctgggaaatttctagcgtcagcatcggaggatacgacatggcga
ctctgggacgtggagactacaacggaactgttacttcaagaaggccactctagaggtgtt
ttcgctatcgcgttcaacactgatggttctctcctagctagtgccggtacagacagtata
ggccgcatttgggatctacgaacaggacgaacagtcatgatcctggaaggtcacatcaaa
ccaatctacgcactagactggggcgttgacggccaccgcgttctctccggctctgaagac
ggctggattaaatgctgggatgtccgaaaggtacagccatccggcggaatcggtgctcac
aaaatggtctcggacctgagatggttcaaaggaaacgacgatcctgctcgaggtttcatt
ccccagctagatgaacaagggactcaaatacccaagaagtccggcacgttcgttgtatct
agtggtttcgacaagacggtcaagatcttctcggcggatgactggtcgcaggtgcagagc
ttgactgggcatactggtaacattcacagcgtagatgttacgagagatgcgaaatggatc
gttagtggtgggtatgatcggacggtcaagctctggggacgtaacgatggcgaaggtatt
tga

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