Drepanopeziza brunnea: MBM_00310
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Entry
MBM_00310 CDS
T03105
Name
(RefSeq) putative ATP-dependent RNA helicase dbp9
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mbe
Drepanopeziza brunnea
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbe03009
]
MBM_00310
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MBM_00310
Ribosome biogenesis [BR:
mbe03009
]
Eukaryotic type
Pre-60S particles
Helicases
MBM_00310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
Methyltransf_35
Motif
Other DBs
NCBI-GeneID:
18756245
NCBI-ProteinID:
XP_007288199
UniProt:
K1X809
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MKRKLDANDVPNPATEIEGKKEDATFAALGLDSRLLQGIAKQNFQTPTLVQSKAIPLALE
GRDILARAKTGTGKTAATSALILVPTRELADQVIKVVESFSAFCTKEIRAVNLAQKVSDA
VLRSLLADSPDIVIATPARASMNLNTAAFSLENLAHLVIDEADLVLSYGYDEDLQNVAKI
MPKGVQTILMSATLTSEVETLKGLFCRNPVVLKLEEAEVEGEGVSQFVVKCAEDEKFLLA
YVIFKLKLIKGKCIIFVGDIDRCYRLKLFLEQFGTRSCILNSELPVNSRIHVVEEFNKNV
YDIIIASDEHEVLGDEDEPKEDNGTNEAVAEDGTAAVKKDKNAEPAAQPSKKKRRTVKKD
KEYGVSRGIDFKNVACVLNFDLPTSSKSYTHRIGRTARAGQTGMALSFVIPKELYRKHKP
TSIQSAKDDEKILAKIVKHQAKKGKEVKPYNFDMKQVDAFRYRMGDALRAVTGIAIREAR
TRELRQELIKSEKLKRHFEENPEDLHHLRHDGELRAARVQSHMKHVPEYLLPKEGRKALT
SGEIGFVGIRKTTDNRIRKARAVNRGKGKGKKVIGRKMDPLKTFKGSLRK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaaactggacgccaatgacgtgcctaatcctgcaactgaaatcgagggcaag
aaggaggacgcaacatttgcagcgttaggactcgactcgcgattactccaaggaatcgcg
aagcagaactttcagacccccacactggtgcagagcaaagcaattcctctggcactggag
ggccgagatatactggcgagggcgaagactggaaccggaaagacagcggccacatccgcc
ctgatacttgtgccgactcgcgaacttgccgatcaagtgataaaggttgtcgagtcgttc
tccgccttctgcacgaaagagatccgcgcggtcaacctcgcccaaaaggtttctgatgcc
gtcctacggtccctcctcgccgactcccccgatattgtcattgcgacgcctgctcgagcc
tcgatgaacttgaacactgcagctttctctcttgaaaacctggcgcatttagttattgat
gaggcggatctggttctgtcgtacggttacgacgaggatttgcagaatgtggccaagatt
atgccgaagggcgtgcaaacaatactaatgagtgcgactttaaccagcgaagtcgaaaca
ttgaaagggctgttctgccggaacccagtggttttgaaattggaggaagcagaggtagaa
ggagagggagtcagccagtttgttgtgaaatgcgcagaagacgagaagtttctgctggca
tatgtcattttcaagctgaagctgatcaaaggcaaatgtattatatttgttggagatatc
gacaggtgctacagactgaagctctttctcgagcaatttggaacgagaagctgtattctg
aactcggaattgccagtcaactcgagaatccatgtggtagaggagttcaacaagaacgtt
tacgacatcatcattgcttctgacgagcacgaggtactaggggatgaggatgagccgaag
gaggataatggaacgaatgaggcagtggctgaggatggtacggcagcagtgaaaaaagac
aagaacgctgagccagcagcacaaccttcgaaaaagaaacgcagaacggtgaagaaggat
aaggagtatggagtttcgagaggtatcgacttcaagaatgtcgcgtgcgttcttaacttc
gaccttcccacgtcctccaaatcctacacccatcgaatcggccgaaccgccagagctggc
cagactggaatggccctgtcattcgtgatccccaaggagctgtatcgaaagcacaaacca
acaagtattcaatcggctaaagacgacgagaagatactggcgaagattgtgaagcaccag
gcgaagaagggcaaggaagtaaagccgtacaatttcgacatgaagcaagtggacgcattc
agataccgtatgggtgatgcgctgcgggctgtgactggtatcgccatccgtgaagccaga
acccgagagttgaggcaggagttgatcaagagcgagaagctgaagcgccattttgaggag
aaccccgaggatctgcatcatttgcgacacgatggtgagctacgagctgcacgagttcag
tcacatatgaagcatgttccagagtatttactgccaaaggagggtaggaaggcactgact
tcaggtgaaattggttttgttgggattaggaagacgactgataatcgaatcaggaaagct
agggcggtgaacaggggtaagggaaaaggaaagaaggtcattgggcgcaagatggaccct
ttgaagacgttcaaggggagcttgcggaaataa
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