Drepanopeziza brunnea: MBM_00536
Help
Entry
MBM_00536 CDS
T03105
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03013
Nucleocytoplasmic transport
mbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MBM_00536
09122 Translation
03013 Nucleocytoplasmic transport
MBM_00536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_00536
03041 Spliceosome [BR:
mbe03041
]
MBM_00536
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MBM_00536
Spliceosome [BR:
mbe03041
]
Complex C
Other components
EJC/TREX
MBM_00536
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MBM_00536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
18756471
NCBI-ProteinID:
XP_007288425
UniProt:
K1XLG8
LinkDB
All DBs
Position
Unknown
AA seq
2401 aa
AA seq
DB search
MAQHDRGNEMRDGGRRSSRGGQGGVGGGRGRRNDARDNPNNLNIQRNGRATPTGPMSPPP
PRPASTAPTPAQTPTPTLEIPSSGFNPISAPFDYVFVTDDRVSAWDSTGHKEVTQKGRGA
VEDEDTTDLSEIFQELIRAALDGRMDPASAGRCIKEILGPDTAPADGSKPTFDAPTAFLD
ILSMVLEVDDSPNISSLRSLMVATEISPNIMRQKLDNKVLSDTGLTRETFSRMSIRQATN
QLYRQANYNLLREETEGYSKLVTELFTTSGSEPPSSEVVEDAFERVKGLIGTFDLDVGRV
LDITLDVFASVLIKQFRFFVKFLRVSSWWPRNGNLQGERHGGLPNWALPTSPHWMPTEED
VFVGKQERAERDILFWDRAREVGLDAFFELGGRHLLDEETKSRILASKGSGDRDIDGDRD
WIEQTGTLPPSGNRVAAQLLGFKLRFYISAARDEDDTLPPNLIYLTALLIKIGFISLRDL
YPHLWPFDDAMPALREKRAAELAEKERLNRPGGGLTNALANAGALTDDTVPGGGRNREAA
SKSDQSKAAAETEGKSGEPEDQKVQLLTCLLTIGAIPEALFMLGRFPWLPEAYPDLMPLL
NRIIQHSIKDVYDQIRPRVSPEAEKNAECPARKVPEPDQSGVAKGQVRLTAVPTRSMLRW
PFPDKYDTNANINYRFYWEEWADNVPVCRNVDDLFILCNTFLNLSGVSIGKDATLLTKLA
RIGNHSLQVDRSQQNFDRWKELLKRLIVPALSMTVSNSALANEIYDMLSLYPIATRYSIY
AEWYEGPTSRQPAMKIAFARAKLETLSTMKRISKINVVPMARALGKITHHAPGIVFNIAL
SQIEAYTNLTEVVVECGKQFTPLGYDVLVWSLMSSLGAKGRNRNNAEFALLPSAWLMALS
RFSGKVYKRYSHLNLVPILRYINDQIYRGNSTDLVILKELIAQMSGIVPDLDYNDAQIVA
MTGGELLKRQTLINLQDKRFESTKTSNRLMNALTYSKLAGELLISIAQYRQAAIFKISDT
DAHIKLLATIVDDTQAALTQYLELLRSNLTVEEFDASVPGIPELLTEFGLDPALAFLIGR
PSLAHLRAAVAVSPMSNGRSKANLRVTDPVATCVDADGDVGMDSGNKNVITGDEALDLTN
QGSQMPDANESSPPVIASDPFNAILEPIISSVQTALPDGSFKYLTPNFYTIFWSSSLGDL
AIPEPSYNAELARLLNELKDLANDRSDMSRLGMAKKEEKKKALNTTREKLFAEFKDSVNA
FTQRKARLLRNKALWFPETVKPENANEAFFEKCLLPRLLLSPGDAEYSFKMIRFIHDNSV
PYFRTLQLYGQIFRQHRLRAMIFTCTVREAENLGRFLKLVLVDLSKWHKDGKMYEKEAWG
AKKNLPGFAKILEENSKPKTLLSHDEFKGVLLKWHRALNSALRDCFEGTEWMHIRNAITV
LKSIVQVFPAIDFQGARFLELLEGIAKREKGVREDLALTGNAVFVQLKKREPSWVMIQAF
GAGNINYANGKPPVKSVLKPTAPDFKPKSAAIPSGAPATKPHPSTEVEDGEVDDAKLSAR
TIPTTAPSNNAATPQDFKRVSSPAAALESKKSELLEKRELFKAQQAKAHESTPPRPVVPI
RQGPVESRPPNSLPSRPDVQFPSRDLLERHPPRHGDRRDGRDPRLPDPRLDRSRPGDRLG
DRLGDRSGDRLRDFSGNDRRVNEPTAREFARPPDRSQGSDRERVRPEPPPRWSAESAREK
IERSANAREADTGRLTREMPPPRPSAVATPDRTPQGTPHAIADRVPAQIMERQDLINPER
AALISTDNETSRSSSPRRGREEIADRVSLRSQSPRRHSADKERPDLRRDDRQPRSGPPDM
YRSRVDDIQPPPAGPRSDRPAERERGPNDRANFQPTPPPRTLDPDHGRLNSTSRSQPDPN
FGRLVAPSTSDIPSGPRDRSNRGGRMGNAPPPSRQDGRTREMPRPPTPEKQQPPTGPSGR
LPKRSASGQTEMGSMSGPTAAVSPTVTSPSASTIHPDRLKHLGASVTLSPVQPPPSPQIP
IGVHPDRLRAFSNEESINPQLPPQANKPRSRPVLPPLATPGPPSGPKMNQSSPVNPPPSS
FAAPTGPSSANERAARGGRRQLAGINTMLQQGAQQNTTDRTNIRGRGGRMSGMGHETLIA
RPSTPLMPVPPPPPGPPPRAEPARDMARDLVNPARADLITGPEASSKDHDQERIGRRERS
GRSRRSSRSPGRERDSKRASHEDERPPRSEHRDRSDRRTGEREPEKDRHQSRLSPAPARD
LMVGRESTGVRDSMGARDAGRDGGRERERGDRERESRRRDGHRDSSGRDPNAAGWNGERG
DRGNERGGSGRGSRDTRNGDMRNEEHRRDGRGNRDDGSRKRRSDGEGLDSRSHNDKRVRR
G
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcatgacagagggaatgagatgcgtgacggaggccgaaggtcgagtcgcgga
ggtcaggggggagtaggcggaggacgaggccgaagaaatgatgctcgcgacaatccgaac
aacctcaacatccagagaaatggacgagcgacccccacaggtccaatgtcccctccccct
ccacgacctgcgagcacagctccaacgcccgcccagaccccaacaccaactctcgaaatc
cccagctcaggcttcaacccgatctccgcgccattcgactatgtcttcgtgacagacgac
cgtgtatccgcctgggacagcactggtcataaggaagtgacgcagaagggccgtggagcc
gtcgaggacgaggacacaacagatctctctgaaattttccaagagctcattcgtgcggct
ctggatgggcgtatggaccccgcctccgctggtaggtgcataaaggagattctagggccc
gacactgcgccagcagatggatcaaaacctaccttcgatgcaccgactgctttcctcgat
attctttccatggtactcgaagtggacgacagtccgaacatttcatccctccggtctctc
atggtcgcgacagaaatatcacctaatatcatgcgccaaaaactggacaacaaggttctt
tcagacactggactcacccgggaaactttcagtcgcatgagcattcggcaagctacaaac
caactttatcgacaagcaaattacaaccttttgcgggaagagacagaagggtactcgaag
cttgtgactgagttgttcacgacgagtggaagcgaaccaccgtcgagcgaagttgtggag
gatgcgtttgagagggtaaagggattaataggaaccttcgatctggacgttggaagggtc
ctggacattacactggacgtctttgcctcggtattgatcaaacagttccgctttttcgta
aagtttttgcgagtcagctcctggtggccccgaaatggtaatctgcagggtgaacgacat
ggaggtctcccaaactgggctctaccgacatctccgcattggatgccaacagaggaagat
gtttttgttggcaagcaagaacgtgctgagagggatattctcttttgggaccgggcacgt
gaagtcggtttggacgctttctttgagcttggaggcagacatcttctcgacgaagagact
aagagtcgtatcctcgcgagcaaaggcagcggcgatagagatattgatggcgatcgcgac
tggatcgaacaaacaggcacgctccctccatctggaaatcgtgttgctgcccaattactt
ggtttcaagctgcgtttctatatctccgctgcccgcgatgaggatgacactcttccacca
aatctcatatacttgaccgctctactcatcaaaatcgggtttatatcacttcgagatctg
tacccacatctgtggcctttcgacgacgccatgccggctttgagggaaaagcgagctgca
gaactggcggaaaaggaaagactgaaccgtcctggcggtggattgacgaatgcattggcc
aacgctggcgctctgactgacgataccgtcccgggcggcggcagaaaccgtgaggcggca
tccaaatctgaccagagtaaggcagcagcagagacggagggaaaatcaggcgaaccggaa
gatcaaaaggtccagctactaacctgcttactcaccattggtgccatccccgaggcgctt
ttcatgcttggtcgcttcccatggctccctgaggcataccccgatctgatgcccctcctt
aatcggatcatacaacactcgataaaggatgtttacgaccaaatccgcccccgtgtatcg
cccgaagccgaaaagaatgcagagtgcccagcaaggaaagtgcccgaaccagatcagtct
ggagtggcaaaaggccaagttcgtcttacagcagtacctactcgaagcatgctacggtgg
ccatttccggacaagtacgataccaatgccaatattaactatcggttttattgggaagag
tgggcagataacgttcccgtttgtcggaatgtagatgatctcttcattctctgcaatacg
ttcctcaacctttctggtgtgagcattggcaaagacgctacgttattgaccaagcttgct
aggattggaaatcacagccttcaagtcgatcgttctcaacagaatttcgatcgttggaag
gagttgctgaagaggctgattgttccagctctcagtatgactgtttccaactcagccttg
gcaaacgagatatacgacatgctgagtctatacccaatcgccacccgatactcgatctat
gctgagtggtatgagggtccgacaagtcgccagccagcaatgaagatcgcttttgcaaga
gccaaactcgaaaccttgagcactatgaagcgaattagcaagatcaatgtggtgccgatg
gctagggcgctggggaagattactcaccatgctcctggtattgtcttcaacatcgctctt
agccagattgaagcatataccaacttgacggaagttgtggtcgagtgcgggaagcagttc
actcctctcggctacgacgtacttgtttggtcactcatgagctctctcggtgccaagggt
agaaatcggaataatgcagaattcgctctactcccaagtgcctggctcatggcgctctca
aggttctctggaaaggtctacaaacgatacagccatttgaaccttgttcccatccttcga
tatattaacgaccagatttaccgaggcaactctacagacctggttattctcaaggagctc
atcgcacagatgtccgggattgttccagaccttgattataacgatgctcaaattgtcgcc
atgacaggtggggaactgctgaaaagacaaaccctcatcaatttacaagacaaaagattc
gagtctacgaagacatcgaacaggctcatgaacgccttgacttactcgaaactggccggc
gagcttctgatttcgattgcgcaataccgacaagcagccatcttcaaaatttctgacacc
gacgcacacattaagctactagcgactattgttgacgacactcaggcagctctcacacag
tatctggagctgcttcgaagcaatcttacggtagaagaatttgatgcatctgttcctggt
atccccgagctcctaacagagttcggcttagatccagcactcgcattcttgatcggacga
cccagccttgcgcaccttagagcggcagttgctgtatcccccatgtcgaacggcagatcc
aaggccaatttacgagtaaccgatccagtagcgacatgcgtcgatgccgatggagatgtt
ggtatggacagtggaaacaaaaatgtcatcactggtgatgaagcgctggacctcacgaac
caaggcagccagatgcccgacgccaatgaatcaagcccaccagttatcgcctcggatcca
ttcaatgccatcctcgaaccgattatttcaagcgtgcaaactgcactcccggatggttcc
ttcaagtaccttactcccaacttctataccatcttctggtcatccagcctgggcgatctc
gctattccagaacctagttacaacgctgaacttgcgcggctacttaatgaactgaaagat
ctggcaaatgatcgttcggacatgagtcgacttggtatggcgaagaaggaggagaagaag
aaggccttaaatacgacacgtgagaaattgttcgccgagttcaaagactcggtaaacgcc
tttacacagagaaaggcacggctacttagaaacaaggcactctggtttccagaaactgtg
aagccggaaaatgccaacgaagctttcttcgaaaagtgtttattgcctcgcctacttcta
tctcccggcgacgccgaatactcattcaaaatgatcagattcattcacgacaacagtgtt
ccatactttcggaccttgcagctgtacggtcaaatattcagacagcatcggctgcgggcc
atgattttcacctgcaccgttcgcgaagcagagaacctaggtcgatttctcaagctcgtg
ctcgtggatctcagcaagtggcacaaggatggtaaaatgtacgaaaaggaagcctggggt
gccaaaaagaatctccccggatttgcgaaaattctcgaagaaaacagcaaacccaagacc
ctcctcagccacgatgaattcaaaggtgtacttctcaaatggcaccgagctttaaactct
gccctaagggactgtttcgaagggacggagtggatgcatattcgcaatgctataacggtt
ctcaaatccattgttcaagtttttcctgctatcgactttcagggtgccaggtttctggag
ctgcttgaaggtattgcaaagcgcgagaagggtgttcgagaagatcttgctctgactgga
aacgccgtattcgttcagttgaagaagagagaaccaagttgggtcatgatacaagccttc
ggtgccggcaatatcaactacgcaaatggcaagccacctgtgaagtcagtcctaaagcct
accgctccagacttcaagccgaaatcagcagccatcccatcaggtgcgcccgctacaaag
cctcacccttcaaccgaagtcgaagacggggaagtcgatgacgccaaactttcagctcgg
actattcctaccactgcgcctagcaataacgcggctacccctcaggacttcaagcgtgta
tcttcccccgctgcggcattggaatcaaagaaatcggaacttcttgagaagagggagtta
tttaaagctcaacaagcaaaggcccacgaatcgacgccaccccgtccggttgtgccgatc
cgccagggcccggtcgaaagcaggcctcctaattctctaccaagccgtcctgacgttcaa
ttcccgagtcgtgatctacttgaaagacaccctccacgtcatggcgatcgcagagatggc
cgagaccctcgtttgcctgatccaagactggatcgttctaggcctggtgacagacttgga
gatagacttggcgatagatctggagaccggctacgcgacttctccgggaatgacagacgt
gtcaatgagcctacagctagagagtttgcgagacctccagatagaagccaaggctccgat
cgtgaacgtgttcgaccagaacccccccctcgttggtctgccgaatctgctcgcgaaaag
attgaaagatctgccaacgcccgagaagctgatactggccggttgactcgcgagatgccc
cctccaagaccctcagcagtagcaacacctgaccgtacgcctcaaggtacgcctcatgcg
attgccgacagagtgcccgctcaaattatggagagacaagatcttattaatccagagcga
gctgcccttatttctactgacaacgagacttcgcggtcatcgtcccctcgacgaggtcga
gaggaaattgcggacagagtttctttgagatcgcaatcacctaggagacatagcgctgat
aaggagcgcccagatcttaggcgtgatgaccggcaacctcgcagtggccctccggatatg
tacaggagtcgagtagacgatattcaaccgccaccagctgggcccagaagtgatcgacct
gcggagagagaacgtggccctaatgacagagccaatttccagccaacgcctcctcccaga
actctcgatcccgatcacggcagactaaactcgacgtctagatcccagccagatcccaac
tttggtcgtctcgtagcgccgtccacctctgacataccgtctgggcctcgcgataggagt
aatcgtggtggtcgcatgggaaatgcaccgccgccatcacgccaagatgggagaacgagg
gagatgccacgtcctccaacccccgagaagcaacaacctccaactggcccatctggtcgt
cttccaaaacgctctgcatctggtcaaactgagatgggttccatgtcaggtcctactgcc
gccgtttctcccactgtgacttcaccctcagcatctacgatccacccagatagactgaag
catctcggcgcgtcggtcactctgtcgcccgtgcagccaccgccttctcctcaaatacca
attggagttcatcctgatcgattaagagccttcagtaatgaggaatcaataaacccccag
ctaccccctcaggctaacaagcctcgttcgagacccgttttacccccgctagcaactcca
ggtccaccttctgggcccaagatgaaccaatcaagtcctgttaatcctcctccgagcagt
tttgcagctcccactggcccttcttcggcaaatgagcgtgcagcacggggtgggagaaga
cagcttgctggcatcaatactatgctacaacaaggcgctcaacaaaataccaccgatcgc
acaaatatccgcggtcgtggtgggagaatgtctggcatgggccatgagacgctcatagcc
cgtccatccactccattgatgcccgtccccccaccaccacctgggccgccacctcgagca
gagcctgctagagatatggctcgggatctcgtcaatcctgcccgtgctgacctgatcact
ggaccagaggcatcaagcaaggatcatgaccaagagcgcattggacggagagagcgatct
ggtcgtagccgcagaagctccagaagtccaggacgagagcgcgattccaagcgcgctagt
cacgaggatgaacgaccaccaagaagcgaacatcgtgatcgcagtgatcgtcggactggc
gagcgagaaccggagaaggatagacaccagagcagattatcaccagcccccgctagggat
ttgatggttgggagagagtcaactggcgttagagactcgatgggagctcgagacgccggg
cgggacggtgggcgagaacgggagcgtggggatagagagagagaaagccgtcgtcgagac
ggacatcgagattcatcaggtcgtgatcctaacgcagctggatggaatggcgagcgagga
gaccgtggaaatgagagaggtggctccggtcggggtagcagggatacgcggaacggggat
atgagaaacgaggagcatcgtagggacggtcgtgggaatagagatgatgggagccgcaag
aggcgtagcgatggagaggggttggattcgagaagtcataatgacaagagagtccggagg
ggttag
DBGET
integrated database retrieval system
