Drepanopeziza brunnea: MBM_00568
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Entry
MBM_00568 CDS
T03105
Name
(RefSeq) transcription initiation factor iif subunit
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MBM_00568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_00568
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
MBM_00568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
18756503
NCBI-ProteinID:
XP_007288457
UniProt:
K1WUW5
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MSASPSGQSNGPTPKGDAPLYVRRSKAADPLRPRKKPVRRTGAAPHASTYKPNGLPVAGR
PTPQYPVNGKLPPRGAGPGPNQSSNVPGAGNSSAKGGWTTSPEGQFMDYPLFTTKRAMRE
GLRYHIARFASKKPVDPSDQNEFTRPVLLHRRDPRQPPPGKGVKDEDQTTMEAPMDSKER
EKQEIAKAEKEKQRALDLAQIAPTGNNAAALAAKKTQAFRHEKTTQVYRLDKTEEQKKLS
DLKYEEALAWHLEDADNKNTWVGNYEAALSDTNVIFVIEGASFKMIPIEKWYRFTPKGQF
KTYTIEEAETQMAKKHKESRWVMKTNEQNESQRAVQESRKAMGSLFTVKAESNTFKSVGK
REVQEMDDMDFEEGDLFQDDDEQVTFDPENDEDAKDAQERVKRDRQGANVFDQTNEADVD
EEEAEDKKAKEARKKLGKDVTKALRKRERNFVYNSDSDHPYSDSSEDDTSDEEKQKEIDK
KKDEEAKNKEKAEEAKNKEKAKLDSTSKPPSGASTKGANTPSGRPKHTDPLEKVKNLKRA
GSPNLSESSGNESTRKKLKKKHQTSASGSSTPVPGSRPMSPAPQQAGPGQISRKGSLVNI
KVNQGKLSDIVSAPPNPSPVRGSAAGDGEATGGEGSDGGKAPQKIKIHIASRAGSRAGSP
AAASGKIFRLCKRRSGGYIEHPVLIRFAASSHTENHLLTYATGESPSSRAQSPSARAQSP
SARAQSPGAGPVGPVQAHEIRKALPARGIPMKDLLKVFVGRVTADNRADFIRLVKSNSAY
GQDKLLRPKTK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctctccctctggccagtccaacggtccaactccgaaaggcgacgctcccctc
tatgtacgaagatccaaggctgcagaccctctgagaccgcgcaagaagccagttcggcgc
actggtgctgccccgcatgcctctacatacaagccgaatgggcttcccgtggctggccga
ccaacccctcaataccctgtgaatggtaaattgcctcctcgaggagcaggtcctggtccg
aatcaatcctccaacgttccaggcgcaggaaattcaagtgcaaaaggtggctggacaacc
tctccggaggggcagtttatggactacccgctctttacaaccaagagagctatgcgggag
ggattaagatatcatattgctcggttcgcatcgaagaagcctgttgatcccagcgatcaa
aatgagtttacgagaccagttctattgcatagacgagatcccagacaaccaccgcctgga
aagggagtcaaagacgaggatcagactacgatggaagccccgatggattcaaaggagcga
gagaagcaagaaattgcaaaggcagagaaggaaaagcagagagctttggatctggcccag
attgcgcctaccggaaataatgccgctgcactcgctgcgaaaaagacgcaggcttttagg
cacgagaagactacccaggtgtatcgactcgacaaaaccgaggagcaaaaaaagctgtca
gatctgaagtacgaagaagctttggcgtggcatttggaggatgcagacaacaagaatacg
tgggttggcaattacgaagcggcgctgtctgataccaacgtcatattcgtgatcgaaggg
gcgagtttcaagatgattcccatcgagaagtggtacagattcacgccgaagggtcaattc
aagacatacactattgaggaggctgagacgcagatggcaaagaagcacaaggaatcaaga
tgggtcatgaagactaacgagcaaaatgaatcccagcgggctgtgcaagaatctcgaaaa
gcgatgggtagtttattcactgtcaaggccgaaagcaacaccttcaagagcgtcggaaag
agagaggtccaagaaatggacgacatggatttcgaagaaggggatctcttccaagatgac
gacgaacaagtcacgttcgatcccgagaatgacgaagatgccaaggatgcccaggaaaga
gtaaagagagatcgtcaaggcgccaatgtatttgatcaaaccaacgaagctgatgttgac
gaggaagaggcagaggataagaaggcaaaggaggcgcgaaaaaagctcggcaaagatgtg
acaaaggcactcagaaaacgagagcgaaactttgtttacaacagtgattctgatcatcca
tactcggattcgagcgaagatgacacgtccgacgaggagaagcagaaggagatcgacaag
aagaaggatgaagaggcgaagaacaaagagaaggccgaagaggcgaagaataaagaaaag
gctaagttggactcaacctcgaagcccccctccggagcctcgacgaaaggagcgaatact
ccatccggccgtcccaagcacactgatcctctggagaaggttaagaacttgaagcgagca
ggttctcctaacctttcagagtcgagcggcaatgagtcgaccagaaagaagctcaagaag
aagcaccagacttcagcttctggctcctccactccagtcccaggatctcgtccaatgtct
ccagcaccccaacaagcaggccccggccagatctcacgaaaaggctctctcgtcaacatc
aaggttaaccaaggcaagctctcggatattgtttctgcgcctccaaatccaagccccgtc
cgaggtagtgctgctggtgatggcgaggccactggaggtgaggggtctgatggaggaaag
gcgccacagaagatcaagattcacattgcatcacgtgcgggttccagagcaggcagccct
gcggctgcatccggtaagattttccgattgtgcaagaggcgtagtggtggctacattgag
caccctgttttgatcagatttgcggcatcctcccacactgaaaatcatctactaacatat
gccacaggcgaatccccttcttctcgtgctcaatcgccttctgctcgtgcccaatcgcct
agtgctcgtgctcaatcgcctggtgcaggtccagtaggtccagtccaagcccacgagatc
cgcaaggctcttccggccagaggtattcctatgaaggatttgctcaaggtctttgtgggt
cgtgttactgctgataacagagccgatttcatccgcttggtcaagagcaactcagcatat
ggacaagacaaactgctgcggccaaagacaaaataa
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