Entry |
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Name |
(RefSeq) nucleoporin SONB
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KO |
K14297 | nuclear pore complex protein Nup98-Nup96 |
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Organism |
mbe Drepanopeziza brunnea
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mbe00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MBM_01063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mbe03019]
MBM_01063
03036 Chromosome and associated proteins [BR:mbe03036]
MBM_01063
Messenger RNA biogenesis [BR:mbe03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MBM_01063
Chromosome and associated proteins [BR:mbe03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MBM_01063
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
2042 aa
MSFGGGFGGFGQNNNTQQTGFGAGGFGSSNTTNNTGTSTLTSSFVSAPENVLDRGFCNQR
GPIAYSNLLCARQALAELETQVSAARTRVAGSLEAAVLGRLVPLALEVCRRISALDRSRI
ECALRSPGVHVKAKSAFASSILSSILVIHYIFIAATMVDRRNRLPLRAAFSGGFGSTTNN
TFGAKPGGFGAAASSGGLFGTSNTATAGGSGFGGFGGNNSTTTAFGGGNNSGGGLFAQNK
PAFGATQAPSNPFGGAATSSPFGGGAATGAFGAPQSTALTTAGVGECQGTGSTQFQPFVE
KEPNSSTNQQNAFQSICFQPPYQKFSPEELRLADYAQGRRYGNGNNQTGAFGATNFGGFG
SSQPASTGFGAQPATTNAFGGGTSTGFGTSQPASTGFGNTATSGGLFGAKPATGGLFGST
PAATNTSTLFGAQPAAQPAGGLFGAQPATTNTGGLFGNNNAAKTPFNFGTSQPAATGTGF
GASTTTGGFGSGGGGLFGNNTQQATTTGFGAAAAQPAASTGFGGFGASNTQQSGGLFGAA
NQAKPATGGLFGSTPAATNTGGLFGSSQPAANTNPFGGSTANQSTGGLFGAKPAATGGLF
GSTQPTNTGSGGLFGSFGNNQNQNQQQNTGGLFGATNNNQAKPGGLFGSTGTQQQTGGLF
GSTNAQQSGGLFGGSANTGQQQQQQQPQNSMFGSGNSIFNTSQQNQQTPQSLTASINDNT
AFGSTSLFANLASTQVNNPGPIATPLSSNVKAKKSAALPMYKLNSTPGSRFSTPQKRPGF
GFSYSNYNSPSSSSSTTSTPGAFSGSLLGGSFGRSLNKSMSTSSLRRSFNTEDSILAPGA
FSSSPNNRHFGSTGSVKRLAISRGLHQDLFSPPEAAQSPQHSSQIQGGILKKRVSFGADV
TLNGHGSSSDSPLKQVNNIGGNSDPASANGKKRTGTSSPVETEQATNANNQLTIVNEEET
ALTQPNSQNPGQDKEVGQYWMKPSREEIENMTREERKAVTGFTVGRNGVGSVSFKSAVDF
TNINLDDIYDNIVVLVPRSATVYPNPAKKPPVGKGLNLPSLISLENSWPRGKTGSNVRFA
KHIEKLKQVKDTTFVDYIKDTGAWIFTVEHFTTYSFPEEEEEEIDATSEFGQSTLSAPPE
TPTPIAPTPKSAHLDESFASDSQMTYDESDPEDTFAFRKKKVLPGAFDDQELYDDENMDG
EYEEQQEESFLDERSVGSQSESGVEEPMDQDGVYEDGESVSIVDQEMAGSYPVAGNTAEL
YDSQDDDEDMDVTMETPGVVLRARQRLLKSSETPLKRKFTAADDWAITLQATVSPKKQDR
ALLKSMIEIHGDDYRGDSAPTPMPRRVVSDNRGFATTIDLMHSLHGTYSPIKAAKVPAKP
EGFKWPYVKRSKTGDQDMSNMSEQDRAFHDSMKPQWGPDGTLVYAAPQSTKPFGRSSRHV
RERDGLLTIQKGGVVSEHRDIRFAKFSNEASGTLLKKHKDMTLFDVSDGVPSARLPEFFS
FDDFFDDGAASNPAATHEKLIWQLASVLFDPIEPPESLQHVPDIRDRLRKDNLSAFWQKL
VDESTSKHVALAKSNEEKAIASLSGHRIPDACGQLVSSGNYHLATLVALIGSKDSIRKDM
RQQLDDWQKTQMLAEFSQPVRTVYEFLAGNVCVCAGSKGEMATFGISKRFGLDWRQAFGL
RLWYAISAKEPLESAVAEFQEDIAQDRETATPHSWYVEQKVPALWDDANLQQREDLLWGL
LKLYAYNNEVNVEDVLRPENSQLSPLDVRLTWQLSRALIASGQVQYSDNPDENADRTTLS
FAAQLSSEGSWLDAVFVLLHLTSAEARARSIQDHLAQHAGLICSEDSQSFATLTQTFQIP
AAWIWEAKALYMRSVERNPIGEVECLIKAGSFNEAHRTFARQVAPQAVVELDYNTLRALL
LGLQDKKNSIAEWHLGGEIYQDFLELLQSDKKGHAVDDLLVERLLAGLPAVVQDSRHPSF
METVAIETISGVVAKTVIAIGKKGEKNNIHNVLRLPLTEDKYLKHTVDLSLEYYRGVMES
AR |
NT seq |
6129 nt +upstreamnt +downstreamnt
atgtctttcggaggaggcttcggtggcttcggccagaacaataatactcagcagaccggc
ttcggagctggtggatttgggtcgagcaacacgaccaacaatacaggtacgtctactctc
acttctagctttgtctctgctccagagaatgtcttggatcgcgggttttgcaatcagcgt
ggacccatcgcttactcgaaccttctctgcgcccgacaggctttggcggaactggaaaca
caggtttcggcagcacgaacacgggtggcgggctctttggaagcggcggtactgggacga
ctggtgcctttggctctggaggtatgtcgccgaatctctgctctggatcgttctcgaatc
gaatgtgcgctgcgctctccgggcgtgcatgtcaaagccaaaagcgcattcgcgtcctct
atcctctcttcaatattggttatccactacatctttattgcagcgactatggttgatcgc
cgcaatcgtcttcccttaagggctgctttctcaggtggctttggcagcactacaaacaat
acttttggagcgaagcctggcggatttggtgccgcggcatctagtggaggattattcggg
acgagcaatactgctacagcagggggttctggtttcgggggattcggaggaaataactcg
acaactactgcctttggcgggggaaacaattccggtggtggattatttgcccagaacaag
cctgcctttggtgctactcaagcgccgtccaaccctttcggaggagcagctaccagctct
ccctttggtggaggcgcagccactggcgcattcggagcccctcagtcgacagccctcacc
actgcaggtgtgggagagtgccagggaactggaagcactcaattccaaccatttgtcgag
aaagaacccaacagcagcacgaaccaacagaatgccttccaaagtatctgcttccagccc
ccgtaccagaaattttcaccagaggaattgagactagcagactacgcccaaggccgcaga
tatggtaacggcaacaaccagacaggagcatttggtgcaacaaactttggtggttttgga
tcaagtcaacccgcctcaaccggttttggcgcgcagcctgcgacgaccaatgcctttgga
ggaggaaccagcacaggttttggcactagtcaacctgcttcgaccggctttggaaacacg
gcaacaagtggtggtctatttggcgcaaagcctgcgactggtggactctttggctctact
ccggcggcgacgaataccagtaccctgttcggagctcaacctgcggcccagccagctgga
ggtctgtttggagcacagcctgctactacaaacactggtggtctctttggaaacaacaat
gctgccaagaccccttttaactttggtacatctcaaccagcagctaccggtacgggcttc
ggtgcttccacaacgacaggaggctttggaagcggcggtggcggcttgttcgggaacaat
actcagcaagctaccacaactgggttcggtgctgctgccgcacagcctgctgcaagtact
ggctttggtggctttggtgcgagcaacacccagcaaagcgggggtctatttggtgcagca
aaccaagccaagcctgctactggcggtctatttggctctacacctgcggctacaaacact
ggcggcctcttcggaagcagccagccagctgccaatacaaacccatttggtggctcaact
gctaatcagagtactggtggcctttttggtgccaagccagcagccacaggaggtctgttt
ggaagcacacaacccacgaacactggtagcggtggtctctttggaagttttggtaacaac
cagaatcagaaccagcaacaaaacacaggcggtctttttggtgctacaaacaacaaccaa
gcaaagccgggtggtctcttcggatctactggaacacagcaacagactggtggcttgttc
ggaagcaccaatgctcaacaatccggcggcctgttcggcggctcggccaacaccggccag
caacaacaacagcagcagccacagaattccatgttcggcagcggcaattccatcttcaac
acatcccagcaaaaccaacaaactcctcaatctcttacggctagcattaacgacaatact
gcatttggctctacgtcgctatttgcaaacctggcctcaactcaagtcaataatcctggc
cccattgccactcctctgtccagcaatgtcaaggctaagaagagtgctgctctcccgatg
tacaagttgaactccactccgggctctcgcttctccacacctcagaaacgccctggcttt
gggttctcttacagcaactataactcacccagcagttcttccagcacaaccagcactcca
ggtgcatttagtggtagcctgcttggtggtagctttggtcgctctctcaacaagagcatg
tccaccagcagtctccgccgaagcttcaacaccgaagatagtatcctggctcccggtgct
ttctcttctagccccaacaacagacactttggaagcactggcagtgtgaagcggcttgcg
attagcagaggtctccaccaagatcttttcagtccccctgaggccgcccagtccccacag
cacagttcacaaatccaaggtggcattctcaagaagcgggtctcgttcggcgctgatgtt
acactcaacggtcacggatcatcttctgatagccccttaaagcaggtgaacaatatcggt
ggcaattcagacccagctagtgccaatggcaagaagcgaacaggcacttccagtcctgtg
gagactgagcaagctaccaatgccaataatcagctgactattgtcaatgaggaggagacc
gctctcacccagccgaattcccaaaatccggggcaagacaaggaagtcggacagtactgg
atgaagccctcaagagaggagattgagaacatgactcgcgaagagcgcaaggcggtcact
ggctttaccgttggtcgtaatggtgttggctccgtctcatttaagtcagccgtcgacttc
acaaacatcaaccttgatgacatctatgataacatcgtcgttctcgtccccagatcggct
acagtgtatccaaaccctgctaagaagccaccagtgggcaagggactgaatttgccatct
ctcatctcgctagagaactcatggcctcgaggcaagacaggtagcaacgttagattcgca
aagcacatcgaaaagctcaagcaggtcaaagatactacattcgttgattacatcaaggat
actggagcatggatcttcactgttgagcatttcaccacttacagctttccggaggaggag
gaggaggagattgatgctactagcgagtttggacagagtacattgagtgctccgccagaa
actcccaccccgatcgcacctacccccaagtccgctcatttggatgagtcctttgcctcc
gattctcaaatgacctacgacgagtccgatccagaggacacattcgcgttcagaaaaaag
aaggttctccctggcgctttcgatgaccaggagctttacgatgacgagaatatggacggt
gaatacgaggagcagcaagaggagtcttttttagatgagcgctccgtgggttcacagtcg
gagagcggcgtcgaagagccaatggatcaagacggtgtctacgaagatggtgaatctgtc
agcatagtggatcaagagatggcgggctcttatcccgtggctggcaataccgcggagctc
tatgactcgcaagacgatgacgaggatatggacgtcacgatggaaacacccggtgtggtt
ttgagagcaagacagagattgttgaagagttcggaaacgcctctcaagcggaagttcact
gcagctgacgactgggcaatcaccttgcaagccacagtgagtcccaagaagcaggatcga
gctttactcaagagcatgatcgagatccacggtgatgattaccgaggtgactcagcgcca
acaccaatgccacggagagttgtctcagacaaccgtgggttcgcaaccactattgatctg
atgcactcgttgcacggcacgtacagtccgatcaaggcggcaaaagttccagcaaagcca
gaggggtttaagtggccatatgtaaagagatcaaaaaccggtgaccaagacatgtcgaat
atgtcagagcaagaccgtgcttttcacgactccatgaagcctcagtggggccctgatggt
actttggtttatgccgctccacaaagcacaaagccatttggacgatcatcccgccatgtt
cgtgagagagatggcttgcttacgatccagaaggggggtgtcgtatcagagcatcgagac
atccgattcgccaaattctcgaatgaagcctccggcactctgctcaagaaacacaaagac
atgaccctgtttgatgtttcggacggtgttccaagtgctcgactccccgaatttttttca
ttcgacgatttcttcgacgatggtgctgcctcgaacccagctgccacacatgagaagctt
atttggcagctggctagtgttctctttgaccctattgagcccccagagagtcttcagcat
gttccagatattcgggatcgtttgagaaaggacaacctgtcggcgttttggcagaagcta
gtggacgagtcgacttccaagcatgttgctctcgctaagtctaacgaggagaaggctatt
gcatccctgtcgggtcatagaattcctgatgcatgtggacaactcgtcagcagcggtaac
taccacctggccactcttgttgctctgatcggtagcaaggacagcatcagaaaagatatg
cgtcaacagctcgatgactggcaaaagacacagatgcttgctgaattcagccagcctgta
cgaactgtttatgagtttctcgctggtaacgtgtgtgtctgtgctggctccaagggcgaa
atggctacttttggcatttccaagcgatttgggcttgattggcgacaagctttcggactc
cgactctggtacgctatctcagccaaggagccactcgagtctgccgttgcagaattccaa
gaagacatcgcgcaagatagggaaactgctacacctcactcgtggtatgtggagcagaag
gtaccggctttgtgggacgacgcaaaccttcagcagcgtgaggacttgttgtggggtctt
ctgaagctatatgcatacaacaacgaggtcaatgttgaagatgtactccgacccgagaat
tctcaactatctcccctcgacgtccgtcttacttggcaactcagccgagctcttatcgct
tccggacaagttcaatactcggataaccccgatgaaaatgctgatcgaaccaccctttcg
tttgctgcccagctttccagtgaaggtagctggctcgatgcagtctttgtccttctacat
ctcacctcggccgaggccagagcaagatccatccaagatcaccttgcacagcacgctggg
cttatctgctcggaagacagtcaaagctttgccacgttgacacagactttccaaatcccg
gcagcttggatctgggaggccaaggctctttacatgcgaagtgtagagagaaacccaatt
ggtgaagtcgagtgcctgatcaaagctggctcattcaatgaagctcatcgcacctttgcc
agacaagttgctccgcaggctgttgttgaactcgactacaacactctcagagcactactt
cttggactccaggataagaagaactcgatcgcggagtggcacttgggtggagagatctat
caagacttcttggagctcctccagagcgacaagaaggggcatgcggttgacgatctgctt
gtagagagattgcttgccggtcttccggctgtagtccaggattcccgtcatccgagcttc
atggagacggttgccatcgagaccatcagtggagtggttgctaagactgtcattgctatt
ggcaagaagggagaaaaaaacaatattcataacgtcttgagacttccactcaccgaagac
aaatatctcaagcacaccgtggatttgagcctagagtactatcggggggtaatggaaagc
gcaagatga |