KEGG   Drepanopeziza brunnea: MBM_01123
Entry
MBM_01123         CDS       T03105                                 
Name
(RefSeq) WD domain-containing protein
  KO
K14962  COMPASS component SWD2
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MBM_01123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbe03019]
    MBM_01123
   03036 Chromosome and associated proteins [BR:mbe03036]
    MBM_01123
Messenger RNA biogenesis [BR:mbe03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     MBM_01123
Chromosome and associated proteins [BR:mbe03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     MBM_01123
    COMPASS/SET1 complex (yeast)
     MBM_01123
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR19_1st NOL11_N Beta-prop_Vps41 WD40_RFWD3 Nucleoporin_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 18757058
NCBI-ProteinID: XP_007289012
UniProt: K1X5M8
LinkDB
Position
Unknown
AA seq 379 aa
MSTTPIAVDSPIGNGLTGKITAVQPTAILSEVISLYRPTKHFRREKTPGQPTTIVSLSFD
DEGGQLLTSESDHTMQIYNVKDGKHHKPLLSHKYGVNHAMFGHATGCIIHASTKLNHTIR
YLSTHDNSYLRYFEGHEDTVTCLSLHPGQDNFLSCSEDNTLRIWDAATKNHCGKLLLNGA
YLAAWDPSGNVFAVASPTAASILLYDFRNYDKAPFSTFDILPFANPETSNLASKGWSKIE
FSNDGKHILLGSAGQSHFLLDAFDGHLKAALRRERGSVRRLYGGDQNPEGVSSQSSDYLY
PGTGDCCFTPDGRYVISGSRGQNALVWDTLAPAPEQFLLPIHQLEYDGESAVIAFNPRYN
FFATGDKDVVFWVPEQSFS
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgtcgacaactcctatagctgtcgactctcccattggcaatggcctcacagggaaaata
actgcagtgcagccgacggcgatactctccgaggtgatctcgctgtatcgaccgaccaag
cacttccgccgagagaagactccgggccagccaacgactatagtctctctcagctttgac
gatgaaggaggtcaacttctcacatcagaaagtgaccacaccatgcaaatctacaacgtc
aaagatggcaaacaccacaagccccttctcagtcacaaatacggggtcaaccatgccatg
ttcggccatgccactggctgcattattcacgccagtactaaactcaaccataccatccgc
tacctctccacccacgacaactcatacctccgctacttcgaaggccacgaagacacagtc
acgtgtctctctttgcaccccgggcaagacaacttcctctcctgcagcgaagacaacact
ctccgcatctgggacgcagcgaccaagaaccattgcggcaaactcctgctcaacggtgcg
tacctcgctgcctgggacccctccggcaacgtcttcgccgtcgcctctcccaccgccgcg
tcaatcctgctttacgattttagaaactatgataaggcccctttctcgacctttgatatt
ctgcccttcgctaacccggaaacgtcgaatttggcgagcaaggggtggagtaaaattgag
ttctcaaatgatgggaaacacatcctgctcggcagtgctgggcaaagccacttcttgctc
gatgcgtttgatggccacttgaaagctgctttacgtcgagaacgtggcagtgtccgaaga
ctttatggtggtgaccagaatccagaaggcgtcagctcgcagtcaagcgactacctgtac
cccggcaccggcgactgctgcttcacaccggatggcagatacgtgatcagtggctcccga
ggccagaatgctctggtgtgggatacgctggctcctgcgcccgaacaattcctccttccg
atccatcagctggagtatgacggggagtcggcggtcattgccttcaacccgcgctacaac
ttctttgctacaggcgacaaggatgtcgtattctgggtcccggaacagagtttttcctga

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