Drepanopeziza brunnea: MBM_01177
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Entry
MBM_01177 CDS
T03105
Name
(RefSeq) 4 family polyadenylate binding protein
KO
K13126
polyadenylate-binding protein
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03015
mRNA surveillance pathway
mbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MBM_01177
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_01177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_01177
03041 Spliceosome [BR:
mbe03041
]
MBM_01177
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MBM_01177
mRNA cycle factors
Stress granule specific factors
MBM_01177
Spliceosome [BR:
mbe03041
]
Complex C
Other components
Complex C specific factors
MBM_01177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_10
RBD_DEAH11
RRM_occluded
RRM_Nup35
YflT
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
18757112
NCBI-ProteinID:
XP_007289066
UniProt:
K1WS92
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MSAATTNTAVDQLASDLNNASLNGGDANGAPAINTAVPATSEDPDTAGPTPSSAAPHPQA
SASLYVGELDSSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKAL
EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK
VAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKA
NFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKA
VDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDD
DKLRELFTPFGSITSAKVMRDTPAETAEAEEKEKKDSEKNKENIKEGETAEAENTEDKPK
SEKRTVGKSKGFGFVCFNNPEEASKAVTDMNQRMVNNKPLYVALAQRKDVRKNQLEASIQ
ARNQIRMQQAAAAAGMPQQFMQTPMFYPPGQQPGFIPQAGRGMAFPPQAGMPIPGAQGGR
PGQFPAGFPPQQAGRGGPGPQQMPPNMYGMPGQFPQAAPYGQQGNPQFIAAMQQAQQAAA
LAGGRGGPGARGPVQGLPGMPPNLAGMQPQMLGGFPQAARGGAQGGRGAQGAQARPGQYS
GGFPPQAGRGMPPQMPGMPPAGGELVGGALAQQLSAVPPAQQKQLLGEALFPKIQVLQPE
LAGKITGMLLEMENQELVNLIEDDSALRSKVDEALTVYDEYVKNNKGEGEGESEDLKEEK
VEEKA
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgctaccacgaacactgctgtcgatcagcttgcgtccgacctcaataatgct
tccttgaacggcggcgatgcaaacggcgctcctgccatcaataccgctgtccccgctacc
tctgaggaccctgataccgctggacctaccccaagctctgccgctccccacccacaagcc
tctgcttctctctacgttggtgagctcgactcctctgtcacagaggctatgctcttcgag
ctgttctctcagattggctctgtcgcttccatccgtgtctgccgtgacgctgtcactcgt
cgatctcttggatacgcctacgtcaactacaacaccaccatcgatggcgagaaggctttg
gaggagttgaactacactcttatcaaaggccgcccatgccgcatcatgtggtctcagcgc
gaccctgctctccgaaagactggccagggtaacgtcttcatcaagaacctggacaccgcc
atcgacaacaaggccctccacgataccttcgccgcctttggaaacatcctcagctgcaag
gtcgctcaggacgagactggagcttccaagggttacggctttgtgcactacgagaccgac
gaggccgccagccaggctatcaagcacgtcaacggtatgcttctgaacgagaagaaggtc
tttgttggccaccacatccccaagaaggaccgccagagcaagttcgaggagatgaaggca
aacttcactaacatctacgtcaagaacatcccagtcgaggccactgacgaggagttccgc
gagttgttcgagaagttcggtgatgttacctctgcctcgctcgctcgtgacacggacagc
aacaagagtcgtggtttcggtttcgtcaacttcatcaatcatgagcacgccgcaaaggcc
gttgacgagctgaacggaaaagacttcaagggccaggacctctacgtcggtcgtgcccag
aagaagcatgagcgtgaggaggagcttcgcaaatcttacgaggctgcccgtattgagaag
gcctcaaagtaccaaggtgtcaacctttacgtcaagaaccttgacgatgacgttgatgat
gacaagctgcgtgagcttttcactccttttggctctatcacctccgctaaggtcatgcgt
gatacccctgccgagaccgctgaggccgaggagaaggagaagaaggacagcgagaagaac
aaggagaacatcaaggagggcgagactgccgaggccgagaatactgaggataagcccaag
tctgagaagcgcactgttggcaagagcaagggattcggtttcgtttgcttcaacaacccc
gaggaagcttccaaggctgtcactgacatgaaccaacgcatggtcaacaacaagccattg
tatgttgctctcgctcagcgcaaggacgtccgcaagaaccagctcgaggccagtatccag
gcccgcaaccagatccgcatgcagcaagctgccgccgccgccggtatgccccaacaattc
atgcaaacccccatgttttaccctcctggccaacaacctggcttcattccccaggctggt
cgcggtatggcattccctcctcaagcaggtatgccgatccccggtgctcaaggtggtcgt
ccaggtcagttccctgctggtttccctcctcagcaagccggccgtggtggaccaggtcct
caacagatgccaccaaacatgtacggtatgccaggccaattcccccaggctgcgccgtac
ggtcagcaaggtaacccacaattcattgctgccatgcaacaagctcaacaagctgctgct
ctcgctggcggccgtggtggaccaggtgcgcgtggcccagttcaaggtctcccaggcatg
cctcctaacttggctggtatgcaaccccagatgctcggtggctttcctcaagctgctaga
ggtggtgctcaaggtggtcgtggtgcccaaggtgctcaggctcgtcctggtcaatactcc
ggaggcttccctccacaagccggccgtggcatgcctcctcaaatgccaggtatgcctcct
gctggcggcgagttagtcggtggtgctctcgctcaacagttgtctgctgtcccacctgcc
cagcaaaagcaactcctcggagaggccctcttccccaagatccaggtccttcaacccgag
ctcgctggtaagattaccggtatgctcttggagatggagaaccaggagctggtcaacctc
attgaggatgacagcgctcttcgatccaaggtcgatgaggctctcactgtttacgacgag
tatgtcaagaacaacaagggcgaaggcgagggtgagagtgaagatctgaaggaggagaag
gttgaggagaaggcttaa
DBGET
integrated database retrieval system
