Drepanopeziza brunnea: MBM_01798
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Entry
MBM_01798 CDS
T03105
Name
(RefSeq) ubiquitin-protein ligase E4
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03040
Spliceosome
mbe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MBM_01798
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MBM_01798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbe03041
]
MBM_01798
04121 Ubiquitin system [BR:
mbe04121
]
MBM_01798
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_01798
Enzymes [BR:
mbe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
MBM_01798
Spliceosome [BR:
mbe03041
]
Complex B
Other components
Prp19 complex
MBM_01798
Complex C
Prp19-CDC5 complex
MBM_01798
Ubiquitin system [BR:
mbe04121
]
Ubiquitin ligases (E3)
U-box type E3
MBM_01798
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
MBM_01798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WDR55
B-prop_COPA_B_2nd
EIF3I
V_ATPase_I_N
eIF2A
U-box
Beta-prop_RIG_2nd
zf-Nse
Beta-prop_IFT140_1st
Beta-prop_HPS5
Lactonase
Motif
Other DBs
NCBI-GeneID:
18757733
NCBI-ProteinID:
XP_007289687
UniProt:
K1X3N0
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MLCSISGEAPQHPVASSKSGNVFEKRLIEAYISENHKDPVNGEDLEVEDLIDLKSARIVT
PRPPTLTSIPSLLSTFQNEWDALALESFSLRKQLQQTRQELATALYQHDAAVRVIARLSK
ERDEARDALSKVTVGAGNARSDDAMQVDSQGLPEELAAKVDATQEKLSKSRRKRPVPKDW
VDAETIGKFAIANASEPLYTGATSLAVDEAGQLVIIGGSEGVAGVYSIPENKLQQSFKAG
SGVTDAIWYGSQPVISTSSGAVKVFGDIEVTFTSHAGSANGLALHPSGDILASVGVDKSF
VFYDLPTGKAVTQVAAFHPDGHLFAAGGANGQIKLFHVKSCESAANFELGGSVQDIAFSE
NGIWFAAVAEGSNSVVIFDLRKEGEAAKVKTLEIGGQVDSIRWDYTGQFLAASGPGGFTI
SQYAKSSKSWSDVISVAVPATALEWGPEAKTLITVNGDGIVTVLG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctcaatctctggagaggctccccaacaccctgtggcttcatcgaaatcagga
aatgttttcgagaagcgcttgattgaagcatacatctcagagaatcacaaagaccctgtg
aatggagaagacttggaagtggaggacctgatcgacctgaagtctgccagaattgtcacc
cctcgacctcctaccttgacctcgatcccttccctcctctcgaccttccagaacgaatgg
gatgcgctcgccctcgaatcatttagcctacgcaaacaacttcagcagacgaggcaggaa
ttggctacagcgctttaccaacacgatgctgctgtgcgagttattgcccggttaagcaaa
gagcgcgacgaggctcgtgatgccttgtcgaaggtcactgttggggctggaaatgctagg
agcgacgacgcaatgcaggttgatagtcagggtcttcctgaggagctggccgccaaagtt
gatgctacacaagagaagctgtccaagagtcgacggaagcgacctgtcccaaaggactgg
gtggatgcggagaccatcggaaagttcgcgattgccaacgcgtcagaacctctatatact
ggtgcaacctcactcgcagtggatgaggctggtcagctagtcattatcggaggatccgag
ggtgttgctggtgtctactctatcccagagaacaagttgcaacagtctttcaaggctgga
agtggtgttacggatgcaatatggtacggaagccaacctgtcatttcaacatcatcaggc
gctgtgaaggtgttcggtgatatcgaggttaccttcacatcacatgcaggaagcgccaac
ggtctggcgctgcacccaagtggtgacattctggcatctgttggcgttgacaagagcttt
gtcttctacgacttacccactggcaaggcagtaacacaggtcgctgcctttcatcccgat
ggtcatctgttcgctgctggaggtgctaatggccaaatcaagctgttccatgtcaagtca
tgcgaaagtgctgccaactttgagctgggaggttcagtccaagacatcgccttctccgag
aacgggatttggtttgcggctgttgcagagggatctaacagtgttgtgatttttgatctg
cgaaaggagggtgaggctgcaaaggtcaagactctggagattggaggacaagtcgacagc
attcgatgggattacactggccagttcctggctgcctcgggaccaggtggcttcaccatt
tcgcagtatgctaagtcctcgaagtcgtggtcagatgtcatcagcgttgctgttccagca
acagcgcttgagtgggggcccgaagcgaagaccttgatcacagtcaacggcgacggaatt
gtaacggtgcttggatga
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