Drepanopeziza brunnea: MBM_01939
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Entry
MBM_01939 CDS
T03105
Name
(RefSeq) pre-mRNA processing splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MBM_01939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbe03041
]
MBM_01939
Spliceosome [BR:
mbe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MBM_01939
Complex C
U5 SnRNP specific factors
MBM_01939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
Motif
Other DBs
NCBI-GeneID:
18757874
NCBI-ProteinID:
XP_007289828
UniProt:
K1X4I3
LinkDB
All DBs
Position
Unknown
AA seq
2360 aa
AA seq
DB search
MSSSIPPPPPGWNSGPPSMGAPPSGAPPPPGYRPGNAHTAKFAQKKKEWLRTQRNRFGEK
RKGGFVETQKADMPPEHLRKIVKDIGDVSQKKFSSDKRSYLGALKYMPHAVMKLLENMPM
PWESAREVKVLYHVNGCLTLVNETPRVIEPVFHAQWATMWVCMRREKSDRRHFKRMRFPP
FDDEEPPLSWSENIEDVEPSEPIQMELDDGEDEAVFEWFYENRPLLDTPHVNGPSYKEWN
LTLPQMATLYRLSHQLLSDLVDKNYFHMFELNSFQTAKALNVAIPGGPRFEPLYKDVDPN
DEDFGEFNAIDRIIFRAPIRTEYRVAFPFLYNSLPRSVKVSWFSHPQIVYVRAEDPSLPA
FYFDPVINPISSRSVAPKNITISHEDELFGFGSNEEPEEDAFELPDDVEPFLADETLYTN
ETASAIALWWAPFPFDRRSGKMVRAQDVPLVKQWYLEHCPQGQPVKVRVSYQKLLKTYVL
NELHKKKPKAQNKQSLMKSLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYL
HLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILKLTKLIVDAQVQYRLSNIDAFQLAD
GILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWAPAWRV
WLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADMMDM
MPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAAVENIILRYVKSKADWWISVAHY
NRERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQHNYMKDGPYVSSEEAVAIYTTTVHW
LESRKFSPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIEQAYDSPGT
TLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDIEPVEKISDAYLDQYLWYQADQRHLF
PAWIKPSDSEVPPLLTYKWAQGINNLDKVWETADGECNVMIETQLSKVYEKIDLTLLNRL
LRLIMDHNLADYISSKNNVQLTYKDMNHVNSYGMIRGLQFSAFVFQYYGLVLDLLLLGLQ
RASEIAGPPQSPNDFLQFRDRETETRHPIRLYTRYIDRIWVLFRFTAEESRDLIQRFLTE
QPDPNFENVIGYRNKKCWPRDSRMRLMRHDVNLGRAVFWDMKNRLPRSVTTIEWDDTFAS
VYSRDNPNLLFSMSGFEVRILPKIRNQNDEFPVKDSVWSLVDNTSKERTAHAFLQVTEED
IAKFNNRIRNILMSSGSTTFTKIANKWNTSLIALFTYYREAAVSTVALLDTIVKCETKIQ
TRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRWASQTDTGITHYRSG
MTHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRRLTLEDLEDSWDRGL
PRINTLFQKDRSTLSFDKGFRARTEFKTYQLMKSNPFWWTSQRHDGKLWNLNQLRSDTIQ
ALGGVETILEHTLFKATAFPSWEGLFWEKASGFEESMKFKKLTNAQRSGLNQIPNRRFTL
WWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQV
FDQELEQLGIETVQKETIHPRKSYKMNSSAADILLFASHKWNVTRPSILFDTKDVIEPTT
TNKFWVDVQLRYGDYDSHDIERYTRAKYLDYTTDSMSIYPSATGLMIGIDLAYNLYSAYG
QYFPGLKALIQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSNQI
QLFIDDTNVYRVTIHKTFEGNLTTKPINGAILIFNPRTGQLFLKIIHTSVWAGQKRLGQL
AKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQLPFQAA
MKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLILILRALHVNQDKTKLLLRP
DKTVITQEHHIWPTLSDEDWIKVETQLRDLILNDYGKKNNVNTSSLTSSEVRDIILGMEI
SAPSMQRQQAAEIEKQQQEQQQLTAVTTKTQNVHGEDIIVTTTSQFEQQTFASKTEWRTR
AIATSNLRTRANNIYISSDDIKEDDHFTYIMPKNVLKRFITIADLRVQVAGYLYGSSPPD
NDQVKEIRCIVMVPQIGSTRDIQLPQQLPQHEYLEQLEPLGIIHTVSGNDPPYMSAMDVT
QHARLMNAHKSWDKKTISMTVSFTPGSVSLSSWALTPSGYKWGAENKDMGSDQPQGFTTS
MGEKCQLLLSDKIRGYFLVPENNYWNYSFMGSAFGSIEKKPVHVKIDTPLPFYSEQHRPI
HFQSFAEMEDLWADHDDNFA
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctctatcccacctccccccccaggatggaattctggtccgccctcaatgggt
gcgcccccctcaggagctcccccgccgcctggataccggccaggcaacgcccatacagca
aagtttgcgcagaagaagaaggaatggctgcgcacgcaacgaaatcggttcggagagaag
agaaaaggaggattcgtggagacgcagaaggctgatatgccccccgagcatctgcgcaag
atcgtgaaggatattggagacgtttcacagaagaagttcagcagcgacaaacgcagttac
ctcggagctctgaaatatatgccccatgctgtcatgaagcttttggagaacatgcccatg
ccgtgggagtctgcaagagaagttaaggtgctataccacgtcaatggatgcctgacactg
gtcaacgagacccctcgagttatcgaaccggtattccatgcgcaatgggcgaccatgtgg
gtgtgtatgaggagagaaaagagcgacagaagacatttcaaacgaatgcgattcccacct
ttcgatgacgaagagcctcctctttcctggtcagaaaacatcgaggatgtcgaaccatcg
gagcccatccagatggaactggacgacggcgaagacgaagcagtatttgagtggttttac
gaaaacagacctctgctcgatacaccgcatgtcaatggccccagctacaaggaatggaac
ctcacattaccccagatggcaaccctctacagattgagtcaccagcttcttagtgatctt
gttgacaagaactacttccatatgttcgagctgaatagcttccaaacggcaaaggctctc
aatgttgcgattcctggaggacctcgatttgagcccttgtataaggacgttgatccaaac
gacgaggactttggagagtttaatgcgatcgaccgtatcatattccgcgcgccaattcgg
actgaataccgagtggcatttccatttttgtacaattctttgccacgaagcgtcaaagtt
tcttggttttcacacccccagattgtctacgttcgcgctgaggacccaagccttccagct
ttctacttcgacccggtcatcaacccgatttcatccagatcagtagcacccaaaaacatc
acaatcagccacgaggatgagctgtttggattcggcagcaacgaggagcccgaggaggat
gcgtttgagctcccagatgatgttgagcctttccttgcagacgaaaccctttacactaac
gagactgcttctgcgattgccttgtggtgggctccatttccattcgatcgacgatcagga
aagatggttagagcccaggatgtaccactagtaaagcagtggtacttggagcattgccca
cagggccagccagtaaaggtccgagtatcctaccagaagcttctcaagacctatgttctt
aatgagcttcacaagaagaagccaaaagcgcagaacaagcaaagcttgatgaagtcactg
aagcaaacaaaattcttccaacagaccaccatcgactgggttgaagctggtcttcaagtt
tgccggcagggttttaatatgctcaacttgttgatccatcgcaagaatttgacatattta
catctcgactacaatttcaacttgaagcctgtcaagactctaaccaccaaggagcggaag
aagtcacggtttggaaacgcatttcatcttatgcgtgaaatcttgaagctgacaaagctg
atcgtggatgcgcaagtgcaatatcgactcagtaacatagatgccttccagcttgcggac
ggtatcttgtatgccttcaaccacgtcggccagttgactgggatgtaccgttacaagtac
aagcttatgcaccagatcagatcttgcaaggatttgaagcatttgatctactaccgattc
aattccggtccagtcggtaagggtcctggatgtggtttctgggctccggcttggagagtc
tggctattctttatgcgtggaatcatcccattgctagagagatggcttgggaacctactt
tcccgacagttcgagggcagacacagcaagggtgttgccaagactgtaaccaagcagcgt
gttgagtcacatttcgatctagaacttcgtgcttcggttatggccgatatgatggacatg
atgcccgagggtatcaagcaaaacaaggtcaacactgttctgcaacatctgtcggaggcc
tggagatgttggaagagtaacattccctggaaggtgccgggtcttcccgccgctgtcgag
aacataattctccgttatgtgaagagcaaagcagattggtggatttccgtggcacactac
aacagagagcgtatccgccgaggtgctacagtcgataagacagtagcaaagaagaacttg
ggacgtctgactcggctgtggctgaaggctgagcaagaacgacagcacaactacatgaag
gatggtccatacgtatcctccgaggaagccgtggccatttacaccaccacggttcattgg
ctcgaatctcgaaaattctcgcctatcccctttcccagtgtttcctacaagcacgatacc
aagattctcatcctcgccctggaacgcctcagagaagcatattccgtcaaaggacgactc
aaccaaagtcagcgcgaagaacttgctcttattgaacaggcctacgacagtccaggaacg
actttggagagaatcaaaagattccttctcacccagagagctttcaaggaagtcggcatt
gacatgaacgacaactacagcacaatcaaccctgtctacgacatcgagcccgttgagaag
attagcgatgcctacctcgatcagtacctgtggtaccaagccgaccaacgccacctcttc
ccagcgtggatcaagccctccgattctgaagtaccgcctctacttacatacaagtgggct
caaggaattaataacctcgacaaagtttgggagactgcggacggcgagtgcaatgtgatg
attgagacacagctttcaaaggtctacgagaagatcgatttgacccttctcaaccgtctt
ttgagactcatcatggaccacaatcttgctgactacatctcctcgaagaacaacgtgcag
ttgacttacaaggacatgaaccacgtcaacagttatggtatgattcgaggtcttcagttc
tcggctttcgtattccaatactatggtctggttcttgaccttctattgttgggcctgcag
cgtgcgagcgagattgcggggccacctcaaagcccaaacgacttcctgcaatttcgagac
cgagagaccgagaccaggcatcccatccgattgtacaccagatacatcgaccgcatctgg
gtacttttccgtttcactgcagaagagtcgcgagatctcatccaacgtttcttgacggaa
cagccggatcccaatttcgagaatgttattggctatcgaaacaagaaatgctggcccaga
gattcacgtatgcgcctcatgagacacgacgtcaatttgggccgcgctgttttctgggac
atgaagaacagactgccgagatctgtcactacgatcgagtgggacgatactttcgccagt
gtctatagcagagacaaccctaaccttctgttctccatgtctggcttcgaggtccgaatc
ttgcccaagatccgcaaccagaatgatgaattccccgtcaaggatagcgtctggtctttg
gttgacaacaccagcaaggagagaaccgcccatgctttcctccaagtcaccgaagaggac
attgccaagtttaataacaggatcagaaatatacttatgagttcggggtcgacgaccttc
accaagattgcgaataagtggaacaccagtctgatcgccctcttcacttactaccgggag
gctgcagtctccacagtcgcgcttctcgatacaatcgtgaagtgtgagacgaagatccag
acccgggtaaagattggactgaattcgaagatgccatcccgtttcccacctgctgttttc
tatacacccaaggagctcggtgggttgggtatgatttcaggctctcatatcttaatacct
acttcagataaaagatgggcgtcccaaaccgacactggcatcactcattatcgctcaggc
atgactcatgatgaggaaacccttattcccaacatcttccgctacatcattccttgggag
gcggagttcatcgactcgcagcgcgtctggactgaatactcccagaagcgcctcgaggcc
aaccaacaaaaccgaagactcacactcgaggacctcgaggactcttgggaccgcggtctg
ccacgtatcaacacccttttccaaaaggaccggagcacgctcagcttcgacaagggtttt
cgagctcgaaccgagttcaagacataccaactgatgaagtctaatcctttctggtggaca
agtcagcgtcatgacggaaagctctggaatttgaatcaactacgatcagatactatccag
gcgcttggtggagttgaaactatcctcgagcacaccctgttcaaggcgacagcattccca
tcttgggaaggtttgttctgggagaaagcatccggttttgaggaatcgatgaagttcaag
aaactcaccaacgcccagagatccggtctaaaccagatcccaaacagacgcttcactctt
tggtggagtcctacgatcaatcgagcaaatgtctacgtcggcttccaggtgcaacttgac
ttgactggtatatttctacatggaaagataccaacactcaaaatcagtttgattcaaatt
ttccgcgcccatctctggcagaagattcatgagtccgtagtgatggatttgtgccaagtt
tttgaccaagaacttgaacagttggggattgaaaccgttcagaaggagactatacacccc
cggaagtcgtacaaaatgaattcgagcgcagcagacattttactttttgccagtcacaag
tggaatgttactcgcccttcaatcctcttcgacaccaaggatgtcattgagccaaccacc
acaaacaaattctgggtcgacgttcaattacgctatggagattatgattctcatgatata
gaacgctacacccgcgccaagtatctggactacaccacggattctatgagtatctaccca
tccgccactggtctcatgatcggtatcgaccttgcttacaatctctactctgcatatgga
caatacttccctggtctcaaagccctgattcaacaggccatggcaaaaattatgaaggcc
aatcctgcattgtacgtcctgcgagagagaatccgcaagggtcttcagctctacgcaagt
gagagcaaccaagagttcctcaattcgcaaaactactccgaactcttcagcaaccagatt
caactgtttatcgacgacacgaatgtctatcgtgtgacgattcacaagactttcgaagga
aacttgacgacaaaaccaatcaatggtgctatcctaattttcaatccgcgtactggtcag
ctcttcctcaaaatcatccacacgagtgtctgggctggtcagaagcgtcttggacagttg
gcaaagtggaagactgctgaagaagttgccgccctcatacgatctttgcccgtggaagaa
cagcctaagcagttgatcgtcacccgaaagggacttcttgatccgctcgaagtccacttg
ctcgattttcccaacatctcgatccgtgcgtctgagttgcagcttccattccaggcggca
atgaaggtcgagaagctgggtgacatgattctccgggctaccgagcctcagatggtgctg
ttcaacctgtacgatgaatggctaaagtccatctcttcatacacagctttctcgcgtctc
attctgattcttcgtgctttgcatgtgaaccaagataagaccaagctgctcctgagacca
gacaagacagtcatcacacaagaacaccacatctggcccacgctgtccgatgaagattgg
atcaaggtcgagacacaactacgggatctcatcttgaacgactacggcaagaagaacaac
gtcaatacatccagtttgacgagtagcgaggtacgagatatcattcttggaatggaaatc
agtgcgccatcgatgcaacgtcaacaagccgccgagattgagaagcagcagcaagagcaa
cagcaactcacagctgtcaccaccaagacccagaacgtccacggcgaggacatcattgtc
acgacaacttcccaattcgagcagcaaacctttgcatcgaagacggaatggcggactcgt
gccattgcgacatcgaatcttcgaactcgggcgaacaacatctacatttcatctgatgat
atcaaagaggacgatcactttacttacatcatgccgaagaacgtactcaaacgattcatc
actatcgccgatctccgcgtacaagtcgctggttatctgtacgggtcgtctcctcccgat
aatgaccaagtcaaggagatccgatgtattgtcatggtacctcaaatcggaagcacacgc
gatatccaactacctcagcaacttccacagcatgaatacctggagcaattggagccgctg
ggaattatccacaccgtgtccggaaacgatccgccttacatgagtgccatggatgtcact
caacatgctcgcctcatgaacgcgcacaagtcatgggacaagaagacgattagcatgacg
gtttctttcacgcctggtagtgtatctctctcctcgtgggctcttactccgagtggctac
aaatggggtgctgagaacaaggacatgggcagcgatcaaccccaagggttcaccacgagc
atgggagagaagtgccagcttctgctgagtgacaagatacgaggttacttcttggtacca
gagaacaactactggaactacagctttatgggaagcgcattcggaagtattgagaagaag
ccggtgcacgttaagatcgacacgccgctgccgttctacagtgaacagcaccgacctatc
cactttcagagttttgcagagatggaggatctctgggccgaccatgatgataatttcgca
tga
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integrated database retrieval system
