Drepanopeziza brunnea: MBM_02326
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Entry
MBM_02326 CDS
T03105
Name
(RefSeq) small nuclear ribonucleoprotein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03018
RNA degradation
mbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MBM_02326
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_02326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_02326
03041 Spliceosome [BR:
mbe03041
]
MBM_02326
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MBM_02326
mRNA degradation factors
5'-3' decay
Lsm complex
MBM_02326
Spliceosome [BR:
mbe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MBM_02326
Complex C
U2 snRNP components
MBM_02326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
AEP1
SM-ATX
Motif
Other DBs
NCBI-GeneID:
18758261
NCBI-ProteinID:
XP_007290215
UniProt:
K1Y1S9
LinkDB
All DBs
Position
Unknown
AA seq
104 aa
AA seq
DB search
MSTGDGSISDFFKTLVDHEVTVELKNDIQIRGTLKSVDQYLNIKLDNISVVEDLKYPHLS
SVKNVFIRGSVVRYVHLPGSAVDTALLEDATRREAANQAGKVAK
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaggcgacggcagtatatcagacttcttcaagactctggtcgaccatgaggtc
accgtcgagctcaagaacgacatccagatccgggggactttgaaatcggtggaccaatac
ctgaacatcaagctggacaatatctcggtggtggaggatctcaagtatccccatctgtct
tccgtcaagaatgttttcatcagaggcagcgtagtccgatatgtacacctgccaggctcc
gcggtagatacggcactgctggaggatgcaacacgtagagaagctgcaaaccaggctggc
aaagtggctaagtga
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integrated database retrieval system
