KEGG   Drepanopeziza brunnea: MBM_02794
Entry
MBM_02794         CDS       T03105                                 
Name
(RefSeq) exosomal core protein CSL4
  KO
K07573  exosome complex component CSL4
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MBM_02794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbe03019]
    MBM_02794
Messenger RNA biogenesis [BR:mbe03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MBM_02794
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     MBM_02794
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 18758729
NCBI-ProteinID: XP_007290683
UniProt: K1X3G2
LinkDB
Position
Unknown
AA seq 214 aa
MAQSTSIAIPGQVLGLTSEYLPGPGVHVHNSTLYASILGPVSKTVPPKPAGPQKRLTKIT
PAAPVALPTLSIERNFTTAGESGTGKKEILPEVNSTVLCRVTRIAPRQATVAILVVGETV
LDGEWQGIIRVQDVRATEKDKVKIFESFRPGDIVRANVVSLGDQSNYYLSTATNSLGVIM
ATSEAGNPMYPVSWKEYRDPDTGASESRKVAKPF
NT seq 645 nt   +upstreamnt  +downstreamnt
atggctcaatcgacaagtatcgccattcccggccaagtgctgggtttaacaagcgaatac
ctccccggccccggcgtccacgtccacaactccacactgtacgcctccatcctcgggccc
gtgtccaagaccgtgcctccaaagcctgccgggccgcagaagagattgacaaagatcacg
ccggccgcgcccgtcgcgctccccaccctctccattgaacggaatttcactactgctggg
gagagcgggacgggaaagaaggagatcttgccggaggtcaacagcacggtgctgtgcagg
gtgacccggattgcgccgcggcaggcgaccgtggccatactggtggtgggcgagacggtg
ctggatggggagtggcagggcatcatccgcgtgcaggatgtacgcgcgacggagaaggat
aaagtgaagatctttgagagctttaggccgggggatattgtgagggcgaacgtggtttcg
ctaggtgaccagtcgaactactacctctcgacggcgacgaatagcttgggtgttattatg
gccacgagcgaggcagggaatccgatgtatccggttagctggaaagagtatcgggatccg
gataccggggcgagcgagagcaggaaggttgcgaaaccattctga

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