Drepanopeziza brunnea: MBM_03360
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Entry
MBM_03360 CDS
T03105
Name
(RefSeq) snf5/smarcb1/ini1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03082
ATP-dependent chromatin remodeling
mbe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MBM_03360
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MBM_03360
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mbe01009
]
MBM_03360
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_03360
03036 Chromosome and associated proteins [BR:
mbe03036
]
MBM_03360
Protein phosphatases and associated proteins [BR:
mbe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
MBM_03360
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
MBM_03360
SWI/SNF complex
MBM_03360
Chromosome and associated proteins [BR:
mbe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
MBM_03360
PBAF complex
MBM_03360
SWI/SNF complex
MBM_03360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
18759295
NCBI-ProteinID:
XP_007291249
UniProt:
K1X067
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MAPDPHQAPLPVHDAADAPAPSLAHRGRGQGRTKAEFDQILLEDYLHKQLLDSDAILDDH
GPTSRTAHITKTLLAQKEDYYNVANTYRPYFPPSRLYGPGYAGYGNGTTDGPPRILYPHN
KPRLGHRKTPKMRQKRKDVAIQAEQEECLMPVRLEIDWDKLKLRDTFTWNYHDRITDIQI
FATGLAEDFGLTGPAAAPVVEQITTQLREQLNDFHPITDPPQEPLMSDLPYSAYKNEELR
ILIKLNITIGPHTLEDKFEWDINNTLTSPEEFAQCIARDLALSGEFTTAIAHSIREQCQL
FIRSLFMVGYPFDGRPVEDADLIAAFLPSPLTSVFRPQQIAKDYLPYLYETTEQELERGE
IIWSREQRRQKRSINRRGGPTLPDLKDRQRTVRTMVVSSVIPGCADTVEESRLYKHVTGA
GRSKRPGREGDLSESSDEEDSNPDSPALALQQGTARTRHMRGAATAAQQRMANLGRSETP
EAAVHHHETRTSARRLVGRDARDESEPLTLIVKLKLGKERMKKFDRAVKAGRSATSQQPE
AVQRAMSTPGPSAAPRPGSMGPPPSTPNAQSQPIPPSTTPGPMGQIGRVDAPPPVGGQNP
PSPIALELEKFRGHLAYISYTLMPATFANNNQPAPAWLTAGLRDLLKVYPNDRFEGVMKY
TAVNKVTELPTAAPQPGQSSDGVKYMFLPRIRCNDCPGKLYTPGPERTVGNFEVHLRNRQ
HRDKVNARIGVSQVSNGS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctccagacccccaccaggcgcctctaccagtccatgatgccgcagacgccccagcc
ccttctctagcccatcgagggagaggacaaggacgtaccaaggcggaattcgaccagatc
ctcctcgaggattatctgcacaagcagcttctagactccgatgcgatcctcgacgaccat
ggcccgacgagtcgcaccgcccacattaccaagaccctgctggcccagaaggaggactac
tacaatgttgccaacacgtaccggccgtactttcccccaagtcgactatacggcccgggc
tacgctggctatggcaacgggacaacagacgggcctccgcggattctgtacccccacaac
aagcctaggctgggtcacaggaagacgcccaagatgcgccagaagcgcaaagacgtcgct
atacaggcagagcaggaggaatgcctgatgcctgtgcggttagaaatcgactgggacaaa
ctcaagctacgagatacctttacttggaattaccatgatcggattacagacattcagatc
tttgcgactggcctggccgaggactttggattgacgggtccggccgctgctccagttgtt
gaacaaattaccacccagctgcgcgaacagctcaacgatttccacccgatcactgatccg
ccccaagagccactgatgtctgaccttccatactcggcatacaagaacgaggaattgcgg
attctcatcaagcttaacatcaccatcggaccgcatactttagaggacaagtttgaatgg
gacatcaacaacaccttgacatcgccggaagagtttgcgcagtgtatagcccgtgatttg
gctctatcgggagaatttacgaccgccattgcacattccatacgggaacagtgtcaattg
tttatacgaagtctgtttatggttggatatccgttcgacgggcgcccagtagaagacgct
gacttgattgctgcgtttcttccttccccgttgacatccgtattccgtccccagcagatc
gcgaaagactacctgccgtacttatacgagacgacagaacaggagttagaacgcggagag
ataatttggtcgagagagcaaaggaggcagaaacggtctataaacagaagaggaggcccc
acactaccagatttaaaggacaggcaaaggacagtacggacaatggtggtctcatcagtc
attcctggatgcgccgacacagtcgaggaaagccggctgtacaaacatgttactggggct
gggagatccaagcgtccgggccgagagggcgacctttcggaatcatctgacgaggaagat
tcgaatcctgactccccagctctggcattgcaacaaggaacagcgaggacgaggcatatg
cgaggagctgctaccgctgcgcagcaacgcatggccaacttaggaaggtccgaaactcct
gaagcagctgtacaccatcacgaaacgagaacctctgctcgaagattggttggccgtgat
gctcgtgatgaaagcgagccacttacgctgattgtgaagttgaagcttggaaaagagagg
atgaagaagttcgatcgggcagtgaaagctggtcgttcagcgacctcgcaacaaccagag
gctgttcagcgtgccatgtctactcctggcccaagtgcagctccacgacctggctcaatg
ggtccgccgccttcaactccaaatgcccagagccaacctataccaccgtcaacgactccg
ggaccaatggggcaaataggtcgagtcgatgcaccaccccccgtgggagggcaaaatcca
ccctcaccaatcgcgttggagctcgaaaagtttcgaggacacttggcttatatttcctac
acattgatgccagcgacgtttgctaacaacaaccagcctgctccggcatggcttacggct
ggtctcagggatcttctaaaggtatatcctaatgaccgatttgaaggcgttatgaaatac
actgcggtcaacaaggttactgagctacctactgcagccccgcagccaggccaaagctct
gacggggtaaagtatatgtttctaccacggataaggtgcaacgactgccccggaaagctg
tacacacccggtccggagagaacagttggtaacttcgaggttcacttgagaaatcgccag
caccgagacaaggtaaatgcgaggataggtgtaagccaagtgtctaatggatcctga
DBGET
integrated database retrieval system