Drepanopeziza brunnea: MBM_03703
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Entry
MBM_03703 CDS
T03105
Name
(RefSeq) RNB domain-containing protein
KO
K18748
protein SSD1
Organism
mbe
Drepanopeziza brunnea
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_03703
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
MBM_03703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
DUF5774
Motif
Other DBs
NCBI-GeneID:
18759638
NCBI-ProteinID:
XP_007291592
UniProt:
K1WY24
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MEQQQNQQQQPQLQPQQAQQHLQPQSQSGVSGPNGRRLHIAHRRSPSELTPLMSMFSSPG
MEQLAIQQQIELLQQQQQQIQATHQQYVNMGMIPPTQHLAPGYNPLQQQMQGIPQNNFQF
PNQMQQQQMNVSMGAPTQPLSHRRNQSALPNMGMGPPPAPSSGASASAFDNFGGQQRGEN
AGRGGRGGGPPGGGHQRRHSLALPEAKKAAELAQQKRTTSGFQFPIPGAAGGDANDGANS
PPAEEKLPQAGNTGQSTRGRGGGHGRSQSMAVNGRGGGSTRGGGSFQFPPMQATVDAGAS
GQSNDIQRRGSGNSSHTRQGSRNFEGNWRNQPQGGAPTQDQGAMGNFQGQGGFQPGHRNR
GSSNQSINSIPSFQYGGQPQIVPMQPGQLMVPQMYAGQQLNPLQISQLQALQAAQMNGQV
GLQGSQHAPHMSGQHQQQQRKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVT
TQDGLLDADIFICGSKDRNRALEGDLVAVELLDVDEVWGQKREKEEKKKRKDVTDSRGGS
NNNDRSHRDNSTTGDEQPSTGEGGGLRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEEEVN
DEQKPLYAGHIVAVVERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGNSGRHQEQRQ
QDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYADRIFVACIKRWPITSLHPFGTL
VEQLGKMGELKVETDALLRDNNFASDEFSDAVTRSVGLDEWSIEKEDEAEIAARRDFRNE
KTFTIDPNGADELDDAIHVKTEEEDGKIEIGIHIADVAHFIKANSLVDREARKRGSAVYL
MNRSCAMLPPKIASEICSLVPGQDRLTVSVVFKVNAHTGMVSDEDTWIGKSIIKSAGKLT
YKEVDAVLSGHLDTKLDGADVREIQILNAVSQKWRERRLGTEGETITPLRLIYQLDDENV
PVEQNIFDSTPSHELIEELMHKANAYVAQRIFKGLPEKALLRRQGPPNPRRLQTFISRMN
KIGYEIDATTSGTLQTSLFKVDDTQIRLGMETLLVKAMHRAKYFIAGKTPAHLYPHYALN
FPLYTHFTNPSRRYADLVVHRQLEAVLSEGKIEFNEDIETLVKTTESCNTKKDSSKNAQE
QSVHIESCRIMDRKREAAGGELISEGIVLAVYDSAFDVLIPEYGFEKRVHCDQLPLKKAE
FRKNDRILELYWEKGVPSSIYIPEDERPRAGASQRMTNAAAAAKKAAVAERAKKEHEEAQ
RKQMETGTISTDDVDALFDDEDDVSDVADSLAGVSLNDRPTQSVPPSPTKNSLQASGKLH
RTRSDSKVPPVEPAEAKLSAKEKYLKFFTLREENGEYIQDVKEMTRVPVILKTDLTKSPP
CLTIRSLNPYAL
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaacagaaccaacaacagcagccgcagctgcagccgcagcaggcacagcag
catcttcagccacagtcgcagagtggtgtatcgggtccaaatggtcgtagactgcacatt
gcccatcgccgaagcccctcggagctgaccccattgatgagcatgttctccagcccaggc
atggagcagctggccatccagcaacaaatcgagcttctgcaacaacaacaacagcaaatt
caagctacacaccaacagtatgtcaacatgggcatgattcctccaacccagcatctcgcc
cccggatacaaccctctccagcagcagatgcaaggcattcctcagaacaacttccagttt
ccgaaccagatgcaacaacagcagatgaacgtttctatgggtgcccctacgcaaccgctc
tcgcatcgccgtaatcaatcagctctccccaacatgggcatgggtcctccacccgccccc
tcctctggagcatccgcatctgcatttgacaactttggaggacaacaaagaggcgagaat
gctggcagaggaggccgcggaggcggaccacccggtggcggacaccagcgtcgtcattct
ttggctctccccgaagctaagaaggctgccgagcttgcccagcaaaaacgcacaacttcc
ggcttccaattccccatcccaggagctgccggtggcgatgcaaacgacggcgcgaactca
ccacctgccgaagagaagctcccacaagctggaaacacaggccagagcacgcgtggccga
ggcggtggacatggacgaagtcagagcatggccgtcaacggacgaggtggtggatctacc
cggggtggaggctcgttccaatttcctccaatgcaggctaccgtagatgcaggagcttcg
ggccagagcaacgacatccagcgaagaggaagcggcaatagttcacacacccgacaaggt
tcccgaaactttgagggaaactggagaaaccagccccaaggcggagctcctacacaggat
cagggtgccatgggcaacttccagggtcagggtggtttccaacctggtcaccgcaaccgt
ggatccagcaatcagtcgatcaactccattcccagtttccagtatggtggccaacctcag
attgtgccaatgcagccgggacagctgatggttccccagatgtacgctggtcagcaattg
aaccctctccagatcagccaactccaggctctgcaagccgctcagatgaatggacaggtt
ggtctccaaggcagccaacacgccccccacatgtctgggcagcatcaacaacaacagcgc
aagacgctcttcaccccgtacctcccacaagctacacttcctgctcttctcggtgacggc
cagcttgtttccggtatcctccgtgtgaataagaagaatcggagtgacgcctatgtcacc
acccaggatggtcttctcgatgccgacattttcatttgtggaagcaaggatcgtaatcga
gccctggaaggagatctcgttgccgttgaactgttggatgtggacgaagtgtggggccag
aagcgcgagaaggaagagaagaagaagcgcaaggatgtcacggatagccgaggtggctcc
aacaacaacgatcgatcccaccgtgataactcaacaaccggcgatgagcaacccagcact
ggcgagggtggcgggcttcgcagacgtggaagtttgaggcagcggccaactcagaagaag
aacgatgatgtggaagtcgagggacagagtctccttctcgtcgaggaggaggaagtcaac
gatgagcaaaagccgctttatgccggacacattgttgctgtggttgagcgtgttgctggc
cagatgttctcgggtacgctgggtctccttcgacctagcagtcaggcgaccaaggagaag
caagaggctgagcgtcaagctcgtgatggtaactctggtcgtcaccaggagcagagacag
caagacaagccaaagatcgtctggttcaagccaactgacaagcgcgtcccactgattgct
attcccaccgagcaagctccacgtgactttgttgagaagcatcaagactatgccgaccgc
atttttgttgcttgcattaagagatggccaatcacctctctgcatcctttcggtactctg
gtcgagcaactcggaaagatgggtgagttgaaggttgagacggatgctcttcttcgagac
aacaacttcgcctccgatgaattttccgatgccgttacacgcagtgttggtcttgacgaa
tggtctattgagaaggaagacgaggctgaaattgccgctcgtcgtgacttccgtaatgag
aagacctttacgattgaccctaatggtgccgatgagcttgatgatgccatccacgtcaag
accgaggaggaagatgggaagattgagattggtattcacatcgctgatgtcgctcatttc
atcaaggcgaactcgcttgttgatagagaagctcgtaagagaggctccgcggtgtacctc
atgaacagatcatgcgccatgctcccaccgaagattgcttccgagatctgctctttagtc
ccgggccaagacagactgactgtatcggtggtcttcaaagttaatgctcacactggaatg
gtctctgacgaagatacatggatcgggaagagtatcatcaagagtgctggtaaattgacc
tacaaggaggtcgatgctgttttgtctggccatctcgacacaaagctcgatggagctgac
gtcagggagattcagattcttaacgccgtatcccaaaagtggcgcgaacgtcgtctcgga
accgaaggcgagaccatcaccccattgagactgatctaccaattggacgatgagaatgtc
ccagtcgagcaaaacatattcgactcaactccatcacacgagcttattgaagagttgatg
cacaaggccaacgcttacgttgcacagagaatcttcaagggtttgcccgagaaggcactc
ctccgtagacaaggtccacccaaccctcggcgcctccaaacattcatctcccgcatgaat
aagataggctacgagatagacgcaaccaccagtggaactctccagactagtttgttcaag
gtcgatgacactcaaatccgactcggaatggagaccctcctcgtcaaagctatgcacaga
gccaagtacttcattgctggaaagacacctgcccatctctaccctcactatgccttgaac
ttccctctctatacacacttcaccaacccctctcggcgctatgcggatctggtcgttcac
cgccagctcgaagcggttctgtctgaagggaagattgagttcaacgaggacattgagacc
cttgttaagaccactgagtcttgcaacaccaagaaggattcttccaaaaatgcccaagag
caaagtgtccacatcgaatcttgccgcatcatggacagaaagcgtgaagctgccggtggc
gaacttatcagcgaaggcatcgtccttgctgtctatgattctgctttcgacgtcctcatc
cccgagtatggtttcgagaagcgagttcattgtgatcagctgccactgaagaaggcagag
ttccgcaagaacgatcgtatcttggagttgtactgggagaagggcgtcccatcctcaata
tacatcccagaggatgagcgtcctagagcaggcgcatctcagcgcatgaccaatgctgcc
gctgccgcaaagaaagccgccgtcgctgagcgtgccaagaaagagcacgaggaagcccaa
cgcaagcaaatggagactggcacgatctctaccgacgatgttgacgcgctgtttgatgac
gaagacgatgtctctgacgttgctgacagtctcgctggcgtatctctcaatgaccgccca
acccagagcgtcccaccctctccaaccaagaactcccttcaagcctcgggtaaacttcac
cgtactagatccgactctaaagtccctcctgtcgagcctgctgaggccaaactcagtgcc
aaggaaaaatacttgaagttcttcactcttcgcgaggagaacggcgagtacattcaggac
gtaaaggaaatgacaagagttcctgtcatcttgaaaacagacctcaccaagagtcctcct
tgcctaaccatccgttctctcaacccctatgctctatga
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