Drepanopeziza brunnea: MBM_03926
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Entry
MBM_03926 CDS
T03105
Name
(RefSeq) histone deacetylase RpdA/Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03082
ATP-dependent chromatin remodeling
mbe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MBM_03926
03083 Polycomb repressive complex
MBM_03926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mbe03036
]
MBM_03926
Enzymes [BR:
mbe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
MBM_03926
Chromosome and associated proteins [BR:
mbe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
MBM_03926
HDAC complexes
Sin3A-HDAC complex
MBM_03926
BRAF-HDAC complex
MBM_03926
REST complex
MBM_03926
SHIP complex
MBM_03926
MiDAC complex
MBM_03926
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
MBM_03926
Heterochromatin formation proteins
Other heterochromatin formation proteins
MBM_03926
Chromatin remodeling factors
NuRD complex
MBM_03926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18759861
NCBI-ProteinID:
XP_007291815
UniProt:
K1XZE3
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSLALDWSWLPEHQLDIMLGNTNSRMPPIDPPRGHIREAKKKVAYFYDSDVGNYAYVAGH
PMKPHRIRLAHSLIMNYGTYKHMEIYRAKPASKHEMSQFHTDEYIEFLQKVTPDNMESYS
KEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRGKCDIAVNWAGGLHHAKKSEAS
GFCYVNDIVLGIIELLRFKKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGT
GELRDIGVGQGQNYAVNFPLRDGIDDVTYKSIFEPVIQAVMVNYQPEAVVLQCGGDSLSG
DRLGCFNLSMEGHANCVEFVKSFNLPTLVLGGGGYTMRNVARTWAYETGILVGEKLDRTL
PYNEYYEYYGPDYELDVRASNMDNANSHDYLEKIKIQVIENLRKTNHNSVQSMETPRETI
IGGRDEDDDILDDADEDENVDTRSSQRRNDKRIVRDDELEDSEDEEENFKNGVRRQPGAF
RRRNQMDYKNDNTASDVDMDSGAHTPSAPTPASHAPAFLVPTQSGEVGSNAPSCADSPKP
AVDTEGDIDMTDDVAEPDQPATAQSIPPAATSAAATVTATTIEPELATVKQESEMETMDT
EVSAEVITGQPEPPAAAAVTEANAEVNAEIMERKASESEARP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgccttggactggtcttggcttcccgaacatcaactcgacatcatgcttgga
aataccaactcaagaatgcctcccattgatcctcccagaggccatattcgagaggccaag
aagaaggtcgcttacttctacgattctgacgtgggaaactacgcgtacgttgctggccat
cctatgaagcctcatagaatcaggttggcgcatagcttgatcatgaattatgggacctac
aagcatatggagatctatcgcgccaaaccagcatcgaaacatgaaatgtcccaattccat
accgacgagtacatcgaattcctccagaaggtcacacccgacaacatggaatcgtactcg
aaagagcaatctaagtacaacgtgggtgacgattgcccggtgtttgatgggctctttgag
ttctgtgggatcagtgctggtggcagtatggagggtgcggctcgtctcaaccgtggaaaa
tgcgacatcgctgtcaactgggctggtggacttcatcatgcgaagaagagcgaagcaagt
ggcttctgctacgtaaatgacattgttctcggtattattgagctgttgcgcttcaaaaag
cgagtcctctacattgacatcgacgttcaccatggtgatggtgttgaggaggcgttttac
accaccgaccgcgtcatgaccgtctcattccacaagtacggcgagtacttcccaggcacg
ggcgagctccgcgacattggagtcggtcagggccagaactacgctgtcaatttcccactc
cgtgacggcattgacgatgtcacttacaagtccatcttcgagccagtcattcaggcagta
atggtcaactaccaaccggaagctgtcgttcttcagtgcggtggcgatagtttgtctggc
gatcgtcttggatgcttcaacctcagcatggaaggtcacgccaactgcgtcgagtttgtt
aaaagcttcaaccttccaacgcttgttcttggcggaggaggatacaccatgcgcaatgtc
gctcgcacctgggcttatgagactggtattcttgttggtgaaaagcttgaccggactctt
ccttacaatgagtactacgagtactatggccccgactacgaattggatgttcgagcttca
aatatggacaatgctaactcacatgactacctcgagaagatcaagattcaagtcatcgag
aacctcagaaagaccaaccacaattccgttcagagcatggagactccccgcgaaacaatc
ataggcggccgagacgaggacgacgacatcttggacgatgctgatgaagacgagaacgtg
gacacccggtcttcacagagacgaaatgacaagcgcatcgtgagagacgatgagcttgag
gacagtgaggatgaggaagagaacttcaagaatggtgttcgccgacaacctggtgcgttc
agacgacgcaatcaaatggactacaaaaacgacaacaccgcctcagatgttgatatggac
agcggagcacacacaccatctgccccaacgcctgcttctcatgccccagcattccttgtt
cccacacagtctggcgaagttgggtccaatgctccgtcatgcgcagactcaccaaaacct
gctgtggatactgaaggggatattgacatgaccgacgacgttgctgagcccgaccaacct
gctaccgcccaatcaataccccctgccgctacatccgctgctgcgacggtcaccgcaaca
accatcgagccagagctagctacggtcaaacaagaaagtgagatggaaaccatggataca
gaagtatcggctgaggttattactggccagcctgagccaccagctgctgcagctgtcacg
gaagccaacgcagaagtaaacgcagagatcatggagcgaaaggcgagcgagtccgaggcc
cggccgtga
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integrated database retrieval system
