Drepanopeziza brunnea: MBM_03961
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Entry
MBM_03961 CDS
T03105
Name
(RefSeq) Zinc finger CCCH type domain containing protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MBM_03961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_03961
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_03961
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MBM_03961
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MBM_03961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_9
GRP
Motif
Other DBs
NCBI-GeneID:
18759896
NCBI-ProteinID:
XP_007291850
UniProt:
K1XZG4
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MGRAELQPCQEAEASNPSHFSPTSTTPATRQSTVHSAPKHPTVLPVQRHPEPEKYKDPGF
CATGLITKALTAPEYLSHLITRYTNTYFAISNNMAAVLSLGPGPKDLARQILEHQAPTYN
FSFSKFLLENYRHGITPNRPMCKAYLQGHCPLGPKCPDRHTAANNPSNYNNLVCKHWLRG
LCKKGESCEFLHEYNLRKMPECNFFAKNGYCSNGDECLYLHLDPSSKLPPCPHYEKGFCP
LGPVCSQRHVRKILCVFYLAGFCPDGKTCKNAHPRWPTDLPKPTVKVEKDPEEIAEEQRL
LMERAEREQAAERERYAGEEGGGGRGRGRWHHGGGGPNWGGGRGRGGHQNRRGRGYNG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtgcggagctacagccttgccaagaggctgaagcgagcaaccccagccatttc
tcgccaacgtcaacaacaccggcaactcgtcaatccaccgtccattcagcccccaaacat
cctacagtactaccggtacagcgacatccagaacccgagaaatacaaggaccctggattc
tgtgccacaggcttgattactaaggcactgactgccccggaatatctctcgcacctcatc
actaggtacaccaatacatactttgctatcagcaacaacatggcagccgtcctatctctc
ggccctgggcccaaggacctcgcccgacagattctagagcaccaggctcccacatacaac
ttctccttctcgaagttcctcctggagaactaccgccatggcatcacgcccaaccggccc
atgtgcaaggcctacctccaagggcactgccccttgggacccaaatgccccgaccgacac
acggccgcaaacaacccgtcgaattacaataacctggtctgcaagcattggctgcggggc
ttgtgcaagaagggcgagagctgcgagttcctgcatgagtacaacctgcggaaaatgccc
gagtgcaatttctttgccaagaatgggtactgttctaatggagatgagtgtctatatctc
catctcgatccctcctcgaagctccctccgtgtccccattacgagaaaggattctgccct
ctgggaccagtctgctcgcaacgccacgtccgcaagatcctttgtgtattctacctggcg
ggcttctgtcccgacggcaagacgtgcaaaaacgctcatccccgctggccaactgaccta
cccaagccgactgtcaaggtcgagaaagaccccgaagagattgccgaggaacagcgcctg
ttgatggagcgagccgagagggaacaagcagccgagcgtgaacgctacgccggagaagaa
ggcgggggaggcagaggccgaggaagatggcaccatggcgggggaggaccgaactgggga
ggtgggcgcggtcggggaggtcatcagaacagaagggggcgaggctacaacggctag
DBGET
integrated database retrieval system
