Drepanopeziza brunnea: MBM_04092
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Entry
MBM_04092 CDS
T03105
Name
(RefSeq) U3 small nucleolar RNA associated protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
mbe
Drepanopeziza brunnea
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbe03009
]
MBM_04092
04121 Ubiquitin system [BR:
mbe04121
]
MBM_04092
Ribosome biogenesis [BR:
mbe03009
]
Eukaryotic type
90S particles
Other 90S particles
MBM_04092
Ubiquitin system [BR:
mbe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
MBM_04092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
eIF2A
WD_LRWD1
Beta-prop_Vps41
NBCH_WD40
Strep_pep
Motif
Other DBs
NCBI-GeneID:
18760027
NCBI-ProteinID:
XP_007291981
UniProt:
K1XAK9
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKIKALSRSASSAQVPGSSAQKQPRNLDPALHPFARSREYTRALNATKLERMFAAPFIAQ
LGKGHVDGVYTLAKDPNSLERFASGSGDGIIKVWDLVSRDETWHTSAHENIVKGMAWTHD
KKLLTCASDRSVKLWSPYDTPSDSSPTATWLGTGAFTSISHHRSSNSFAVSSDVISIYDL
EKHTATPEVLRWPTTTDTITNVSFNPIETSILASAATDRAIVLYDLRTSTPLARTILKFA
GNSISWNPMEAMNFAVASEDHNVYIFDARKMDRALNVLKDHVAAVMDVEFSPTGEELVSA
SYDRTIRLWSRMKGHSRDIYHTKRMQRVFSCKWTPDSKYILSGSDDGNIRLWRANASARG
GIKSAKQRQALEYSEALTQRYAHMPEIRRIKRHRHIPKVVKKAGEIKTEELKAIKRKEEN
ERKHTKKQFSKRRNEREKMILATET
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaagctttgagtaggagcgcatcctcggcgcaggtcccaggatcttcggcg
caaaaacagcctcgcaacctcgaccctgccctccacccatttgctcgctcccgcgagtat
accagagccctcaatgcaacgaaactcgagcggatgtttgctgccccttttattgcacaa
ctcgggaagggtcacgtagacggagtctatactcttgcgaaggatcccaattcattagag
agatttgccagcggaagtggtgacggcattatcaaagtctgggatttggtcagccgagac
gaaacatggcacaccagtgctcatgaaaacattgtaaagggaatggcctggacgcatgac
aagaagcttttgacttgcgcaagcgatcgctcagtcaagctatggtctccatacgatacc
ccttcggacagctccccaacggcgacctggctcggaactggtgccttcactagtatatca
catcatcgatcgagcaattcgtttgcagtctcgtccgacgtcatatcaatttacgatctg
gaaaaacatacagccactcccgaagtccttcgatggcccactactaccgataccattacg
aacgtgtccttcaatccgattgagacctctatcctggcatctgcggcgactgacagagct
attgtcttgtacgatttgaggacatccacgcctttggcgaggactatcctgaagtttgca
ggaaactcgatttcgtggaatcctatggaggcgatgaattttgcggtggcgagcgaagat
cacaatgtctatatttttgatgcgaggaagatggatcgggctttgaacgtattgaaggac
cacgtagcggcagtaatggatgttgaattcagccctactggagaagagctcgtctcggca
agttacgacagaacaatcaggctatggagcaggatgaagggtcactcgagagatatctac
cacacaaagcgaatgcagcgagtcttttcctgcaagtggactccggattccaaatacatt
ctgtctggatctgacgacggaaacatccggctgtggcgcgccaatgcttccgcgagagga
ggcatcaagtcagccaagcaacggcaagcattggagtacagcgaggctttgacgcagaga
tatgcgcatatgcctgagatcagacgtatcaagcgccacagacacattccgaaggtggtc
aagaaggctggggagatcaagaccgaggagctgaaggctatcaagaggaaagaggaaaac
gaacgcaaacatacgaagaaacagttttcgaagagaaggaacgagagagagaagatgatt
ttagcgacggaaacgtga
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