Drepanopeziza brunnea: MBM_04285
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Entry
MBM_04285 CDS
T03105
Name
(RefSeq) 3' exoribonuclease family protein
KO
K12587
exosome complex component MTR3
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_04285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_04285
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MBM_04285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
18760220
NCBI-ProteinID:
XP_007292174
UniProt:
K1XXA0
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MSDRRRINGPSGGTSAPIYSKYIQKDAASQTERPSRARQPNVLRKMFLKTGVTPSASGSA
YLELEASRAANSRAPGLASLSTSGLKLTCTVHGPRPLPKSAPFSPHIILSTHVKYAPFAT
RKRRGYLRDSSERDLSVHLETALRGVIIGDRWPKSGVEVIITILEGEEDQWWGDDRGGST
TAGEWGMMSVLSGCITVASAAIADAGIDCVDAVSGGVAAVVKNNQSKQSTLVLDPVPSEH
QEILAACIVAYLPARDEITDLWVKGEIGHGDRSINTAQTTSFEELADNAVQAALGSHRVL
VAALKETANMKLGKHSAGGIVDNF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataggaggagaatcaatggaccttcgggcggtacttccgcaccgatctactcc
aaatacatccaaaaagatgctgcatcgcagacagagagaccctccagagcaagacagccc
aatgttttgaggaagatgttcctgaagactggcgtcactccttcagcttcaggatccgca
tacctggaacttgaggcttcaagagcagccaactccagagcccccggccttgcttctctc
tcgacctccggcttgaagctcacctgtaccgtccacggccctcgccctctccccaagtct
gcgcctttctcgcctcatataatactctctacacacgttaaatatgcccctttcgctaca
cggaagagacgaggctatctgcgggactcgagcgagagagatctgagcgtacacttggaa
accgctctcaggggtgtgatcatcggagacagatggcccaagagcggagtggaagtcata
attaccatccttgaaggcgaggaagaccaatggtggggcgacgaccgcggagggtctacc
accgcaggagaatggggcatgatgagtgttctcagtgggtgcatcacagttgcttcagct
gcgattgccgatgcgggtattgattgtgtggatgccgtctctggtggcgtagcagctgtg
gttaagaacaaccaaagcaagcaatcgacgctggttctggatcctgttccatctgagcat
caggagatccttgccgcttgcattgttgcctacctgcctgctcgagatgaaattacagat
ctatgggtcaaaggggaaattgggcatggagaccggtcaattaatacggctcagacaact
tcatttgaggagctggctgataatgcggtacaagctgcgctgggctcgcaccgagtgctt
gtggcggctttgaaggagactgctaatatgaagttgggaaagcattcggctggtggtatt
gtcgacaacttctga
DBGET
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