Drepanopeziza brunnea: MBM_04370
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Entry
MBM_04370 CDS
T03105
Name
(RefSeq) nucleoporin-interacting protein NIC96
KO
K14309
nuclear pore complex protein Nup93
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MBM_04370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_04370
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MBM_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
18760305
NCBI-ProteinID:
XP_007292259
UniProt:
K1XXI2
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSSLFGNLNNNTKSDYGGLFGDPKPAAGGGSGGGGLFGGLGLGGVSTTGGTTGNAGGGGL
FGGLAGSTQPTGNAGGRGMFGGLGGSIQPTSNAGGGGLFGGLVGATGGTTQPTGGSVFGG
LGTSTQQNNASNMFSSGLGATSQSQGAAGLAGSTAGPQQSQQNGQNNAYFDAILERSRKR
AHAEAISEDLPQLQLGLGDIRQRIKRLGAENADLADGRAHYLLAASGVDPGATVRDFNLF
TVANTKTERPTVPDFEDDTDVESYLANLQTQTTLNMISDGISRSIRDFDAYLDENVTVEW
ESQQKRIYQHFGIKPKENAGYGGRGSFMAAPASPPGGFGRSRRSKAAGLAASRADNGGGS
TFGRSSMQKSVIGNAGPVGTGHQPLFADVEKQMEANGVNMSGPHDRFQRDKQNKFAEKVQ
LLNLARLNKYPFAISKEFGDVVRMAGDQHGPDLVKAYRALSAIVGEDADAKGFSENRTAR
ERQYASAYLSDTSDAATVNFRRRILQGGARCLERLAFEKMEEQVAKNPRDANLGGIPNTI
NKIKAYVRLQAIKKNLAGDNADLQILGEDYVWALLFFLLRSGHVAEADEYVRTNSIAFRA
IDRNFAAYMHAYATNEDRRLGDDLQVRINAEFNQRLRIAPENSIDPYRMACYKIIGRCDL
RHRALDGLKQDIEDFAWIQLVLAREISRSDSMSSDVYDLNAAQDTIREIGNRFFSKAGGA
EIGSSFGAFVFLQVSLGMFEEAVHYLYTHSYVDGVHLAIALDFYGLLRVSDPSTAGEDLL
SRTTRNQPQINFGRAVGLYTRDFRAANVSAAVDYLVLICLNQDLPGQAGAHQVMICHEGL
RELALESREFALLLGDMRSDGQRINGLIEDRVGLIGLEEAGDFMRTITMQAASVADDNGR
TTDAVLLYHLATEYDNVIVTINRALSEAISTPLGQEPLKLQTLKARSVTNARNMQGTESN
LTSIDDPFVLAEKMSDIYGHQMYRMKIKAVNQQACSSLQVMYQAKDMVENGRWPEALDLM
KSLAILPLEARGDATTIRSCATKFTALPQPVAQNVPNLLMWSIMCCNNQRSLLLNSQFGG
NEGTRQAMIDELKQMNMDLTTYTSQLRYRFPAHIHEALARAQSDM
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgctctttggtaacctgaataacaacaccaaatccgactatggcgggctgttt
ggagatccgaagcctgcggcgggtggcggcagtggtggtggtgggttgtttggtgggcta
ggtctgggtggtgtaagtacgacgggaggtacgacgggtaatgctgggggaggagggctg
tttggaggtttggctggcagcacgcaaccgacgggtaatgctgggggaagagggatgttt
ggaggtctgggtggcagcatacagccgacgagtaatgctgggggaggagggctattcgga
ggtcttgtaggagcaacaggaggaactacacaaccaacaggaggaagcgtgtttggagga
ttgggcacaagcacgcagcagaataatgccagcaacatgtttagctcaggcctaggagcg
acatcacagtctcaaggagctgctggccttgctggttctacagcaggtccccaacaatcg
cagcagaatggtcagaacaacgcctatttcgatgctatactggagcgcagccgcaagaga
gcacacgccgaagctatctcggaggatctcccgcaactccaactcggtctgggggatatc
cgccagcgtatcaagcggttaggtgctgagaatgccgatctcgcggatggcagagctcac
tacctgctcgcagcttcaggcgttgacccaggggccacagtccgcgacttcaacctcttc
accgtagcgaacacgaagaccgagcggcctaccgtacccgacttcgaggatgataccgat
gtggagtcgtatctggcgaacttgcagacgcagacgacgttgaacatgatttcagatggc
atctcacggtcgatccgcgatttcgatgcgtacctggatgaaaatgtgacggtggagtgg
gaatcgcagcagaagaggatataccagcattttgggatcaagccgaaggagaatgccggt
tacggaggacgaggaagcttcatggcagcccccgctagcccgcctggaggattcggaaga
tcgagacgaagcaaagccgcgggtctcgctgcatcccgggctgataatggtggtggaagc
acatttggacgctcgagcatgcagaagtcggttattggaaatgctggtcccgttggtact
ggccaccagcctctgtttgcggatgtggaaaagcagatggaggcaaatggtgtcaacatg
tctggccctcacgatcgctttcagcgagacaaacagaacaaattcgctgagaaggtgcaa
cttttgaatctcgccagactcaacaaatacccgttcgcaatttcgaaggagtttggagat
gttgtaaggatggctggtgaccagcatggacctgatttggtgaaggcatacagagctctg
agcgctattgtgggagaagatgcggatgctaagggattttcagagaataggacggcgagg
gagagacagtacgcctcggcctaccttagcgatacttctgatgcagctactgtcaacttc
cgccgaagaatactccaagggggtgctcgatgtttggaaagattagcgttcgaaaagatg
gaagaacaagttgccaaaaacccacgagatgccaatcttggcggcattccaaacaccatc
aacaagattaaagcttatgttcgtttacaagctatcaagaagaaccttgctggcgacaat
gccgacttacaaatacttggcgaggactatgtctgggctcttctcttctttctgttgaga
tcgggtcacgttgccgaggcggatgaatatgttagaaccaactccattgcattcagagcc
atcgaccgcaactttgctgcttatatgcacgcttatgcgacgaatgaagataggagactc
ggtgatgatctccaggttcgaatcaacgccgaattcaaccagcgccttcgaattgcgccc
gagaactctatcgatccgtacaggatggcttgttacaagattattggtcgttgtgatctc
agacaccgagctttggacggacttaagcaagatattgaagacttcgcctggattcagctg
gttctagcacgtgagatcagccgctccgactccatgtcgagtgacgtctacgacctcaac
gctgcccaggataccatacgagagattgggaaccggttcttctccaaggccggtggtgct
gagattgggagctcctttggagccttcgtcttcctgcaagtctcgcttggcatgtttgag
gaagccgttcattacctgtatactcattcctacgtggatggtgtgcaccttgccattgcc
ctggacttctacggcctcctcagagtatcagaccccagtaccgcgggcgaggatctcttg
agcaggaccaccagaaatcaaccccagatcaactttggtagagcagttggtctttacaca
cgcgacttcagagctgccaatgtctcggccgctgttgactaccttgttcttatctgcctc
aaccaagacttacctggtcaagcaggagctcatcaagtcatgatctgccatgagggactg
cgtgaactcgctctcgagagtagagagtttgcacttcttctaggagacatgcgttctgat
ggacaacgcattaatggtctcatcgaggaccgtgttggcttgataggtctggaggaggcc
ggtgacttcatgcgaacaatcacgatgcaggcggcaagcgttgccgacgataacgggcgt
acgactgacgctgtgctgctgtaccatctggcaacagagtacgacaatgttattgttacg
atcaaccgagctctcagcgaagctatctccacccctcttggtcaggaaccattgaagttg
cagacactgaaggctcgctctgtcacgaatgctaggaacatgcaaggcaccgagtctaat
cttacctctatcgatgatccattcgtcctggcggagaagatgtcggatatctatggccac
caaatgtacaggatgaagatcaaggctgtcaaccagcaggcttgcagctctttgcaggta
atgtaccaagccaaggacatggtcgagaatgggaggtggcccgaggcgcttgatcttatg
aagagcctcgcaatcctccctctggaagccagaggcgatgcgacaaccatccgcagctgc
gccaccaagttcaccgcgctccctcaacccgttgctcaaaatgtgcccaatctgctgatg
tggtcgattatgtgctgcaacaaccaacgctctctcctgctcaacagccagtttggcggt
aatgagggcacgagacaggcgatgatagatgagctgaagcagatgaatatggatttgacg
acttatacgagtcaattgaggtatagatttccggcgcatatccatgaggctctggcgaga
gcgcaatcggacatgtga
DBGET
integrated database retrieval system
