KEGG   Drepanopeziza brunnea: MBM_04476
Entry
MBM_04476         CDS       T03105                                 
Name
(RefSeq) putative DNA ligase (Polydeoxyribonucleotide synthase)
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03030  DNA replication
mbe03410  Base excision repair
mbe03420  Nucleotide excision repair
mbe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MBM_04476
   03410 Base excision repair
    MBM_04476
   03420 Nucleotide excision repair
    MBM_04476
   03430 Mismatch repair
    MBM_04476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbe03032]
    MBM_04476
   03400 DNA repair and recombination proteins [BR:mbe03400]
    MBM_04476
Enzymes [BR:mbe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MBM_04476
    6.5.1.6  DNA ligase (ATP or NAD+)
     MBM_04476
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MBM_04476
DNA replication proteins [BR:mbe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MBM_04476
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MBM_04476
DNA repair and recombination proteins [BR:mbe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MBM_04476
   NER (nucleotide excision repair)
    Other NER factors
     MBM_04476
   MMR (mismatch excision repair)
    Other MMR factors
     MBM_04476
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 18760411
NCBI-ProteinID: XP_007292365
UniProt: K1WIZ8
LinkDB
Position
Unknown
AA seq 918 aa
MPPKQSTLGYVKDPQTTLGKFFGNPNGTKAPSKQSKLTFGSKATSTTPSSSLVKENEDTD
MKDEDEDLEAKPKVKKEVKKKEVADIKENVKPEKETKKRSRSPAPADLESENKVEVKKEV
IEEDDEGEDDEPVVKRPRRADRVEVEDKPMLSEPKPESKVKVKGKTTPKKSTAPGPKKEK
KAVKEEMEEDEEKVEEVGSSLKRRASNASSVSEVEEEMDEDDDDEKPEAAAKAREKVQTT
IKAKTKDPYPDWKPGEPVPYAALCTTFSLIEMTSKRLVIAAHCSLFLRQVLRLTPDDMLP
TVLLMINKLAADYAGIELGIGESLIMKAIGSTTGRNLAQIKQDQREIGDLGLVAVKSRAN
QPVMFKPRPLTIRAVHKGLMDVATTSGNGAQGRKVDLIGKLLAAADVAKPGKVDITKDKG
GPSEAKFIVRFLEGKLRLGLAEKTVLVSLAQAMVCHETEAKGSGKVPTTEQLAKGEAILK
AVHSELPSYDVIIPAMLEHGIFNLRDNCKLQPGVPLKPMLAKPTKAITEVLDRFENQTFT
CEYKYDGERAQIHYVAKDSAQQYRGSAESATKTAHGGLAAIFSRNSEDLSKKYPDILAKL
NTWVKPDTKSFVMDCETVAWDLEEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLFL
NGEAVVGKSLRERRELLHESFTPVEGEFSFATSMNGQEIEEIQIFLDESMKASCEGLMVK
MLDGAESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYHGKGKRTSVYGAFLLASYN
STSDTYETICNIGTGFSEAVLETLHAELSPLIIDRPKPFYSHSAGNTHQPDVWFEPKYVW
EVKTADLTLSPRYKAGCNEGLEGGGDKGISLRFPRFIKVRDDKKPDEATGSRQVVEMYRK
QESVTKSKGPAVDDDFEY
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgcctcccaagcagtccacgctggggtatgtcaaggaccctcaaaccaccttgggcaag
ttcttcgggaatcccaacggtaccaaagctccatctaagcaatccaaactcacctttggc
agcaaagccacaagcaccactccaagttccagcttagtcaaggagaatgaggataccgat
atgaaagacgaggacgaggatctggaagccaagcctaaggtgaagaaagaggtcaagaag
aaggaagttgcggatatcaaggagaatgtgaagccagagaaggagacgaagaagcgatca
agatctccagctcctgcagatctagagtcggaaaataaggtggaagttaagaaagaagtt
atcgaggaagatgatgaaggagaagatgacgagcctgttgtaaagcggcctcgccgcgcc
gacagagtcgaggtggaggataagcctatgctatcggagccgaagccagaatccaaggtc
aaagttaaaggaaagacaacacccaaaaaaagcacggcaccaggccccaagaaagaaaag
aaggctgtcaaggaggagatggaagaagatgaggagaaagtcgaagaagtcggttcgagc
ttgaagagaagagcttcgaatgcatcctcggtctcagaagtggaggaagagatggacgaa
gatgacgatgatgagaagccagaagccgctgcaaaagcccgtgagaaggtccaaactact
ataaaggccaagacgaaagacccgtatccagactggaagcctggagagccggttccctac
gctgctctttgtactaccttctccctcattgagatgacttccaagagactggtcatagct
gcgcactgctccttgttcctccgacaagttctcagattgacacctgatgacatgttaccg
accgtgcttctcatgattaacaaattggctgccgattatgccggcatcgagctgggaatt
ggcgagtcccttatcatgaaggccatcggtagtacgacgggtcgaaatctggctcaaatt
aagcaagatcaacgagagattggcgatcttggtttggttgctgtcaagagcagagctaac
caaccagtcatgttcaagccgagaccattgacaattcgagctgttcataagggcttgatg
gatgttgctaccacttctggtaatggtgctcagggccggaaggttgacttgattggaaag
cttctcgctgcagccgatgtcgcaaagcctggaaaggttgatatcacaaaagacaaggga
gggccgagtgaagcaaagttcatcgttcgatttcttgagggcaagctccgtctcggtctt
gctgagaagactgtccttgtttctcttgctcaagctatggtttgtcatgagacagaagcc
aaaggctctggaaaggttccaactacggagcagctggccaagggagaggcgatactgaag
gcggtccacagtgaacttcccagctacgatgtcatcattccagcgatgttggagcatggc
attttcaaccttcgagacaattgcaagctccaacctggtgtgcctctaaagcccatgttg
gcaaagccaactaaagccattacagaagtcctggatcgttttgagaaccagactttcaca
tgcgagtacaagtacgatggagagagggctcagatccattatgtggccaaggactccgca
caacaatatcgtggctcagccgaatcagcaacaaagactgcacatggtggactcgcagca
atcttctctcgtaattctgaagatctttccaagaagtaccccgatatcctggctaaactc
aatacctgggtcaagccagacaccaaaagcttcgtcatggactgcgaaactgttgcttgg
gaccttgaagagaagaaagttctcccttttcaacagcttatgactcgcaagaagaaggat
gtcaagattgaggatgtgaaagtcaaagtctgcgtctttgcctttgacttactcttcttg
aacggagaagctgttgttggcaaatctttgcgcgaacgtcgcgagctccttcatgagtct
tttaccccagtagagggagaattctcttttgctaccagcatgaacggccaggaaatcgag
gaaatccaaatcttcctcgacgagagtatgaaagcttcctgcgaaggacttatggtcaag
atgttggatggcgcagaaagtggctacgaacccagcaagcgcagtagaaactggctcaag
atcaagaaagactatctctccggcgttggcgactctctcgatttggtagtcctcggggcc
taccacggcaaaggtaaacgcacctccgtctatggtgctttcctcctcgcttcctacaac
agcacatctgacacctacgaaaccatctgcaacatcggcactggtttctcagaggccgtt
ctggagaccctccacgccgagctctcgcccctcatcatcgatcgccctaagccgttctac
tcacactctgcgggcaacacgcatcaacccgatgtctggttcgagccaaaatatgtttgg
gaggtgaagacggcggatttgactctgagtccccggtacaaggctggatgcaacgagggc
ttggaggggggcggggacaagggtatctcgctccggttcccgagattcatcaaggtccga
gatgataagaagccggatgaggcgacggggagtaggcaggtcgtggagatgtatcggaag
caggagagcgttacgaagagcaagggaccggcggtggacgacgacttcgagtattga

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