Drepanopeziza brunnea: MBM_04681
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Entry
MBM_04681 CDS
T03105
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03020
RNA polymerase
mbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MBM_04681
09124 Replication and repair
03420 Nucleotide excision repair
MBM_04681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_04681
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_04681
Enzymes [BR:
mbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MBM_04681
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MBM_04681
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MBM_04681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
18760616
NCBI-ProteinID:
XP_007292570
UniProt:
K1XWJ2
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MADQYQDDYEYEQEEDQFEEEEEDDGITAEDCWMVISSFFEAKGLVSQQVDSFDEFVSTT
MQELVEENSQLTLDQNNPPSADENPIALRRYEIKFGTVLLSRPAMTEGDGTTQVMLPQEA
RLRNLTYSSPLYLEMTKNVSVAVERNVPLNELDDEQEAEMAATGIHPTRLVWEDEDGREA
GPDKIEPTPDRVFIGKLPIMLKSKYCILKDLDEDDLYAWNECPYDQGGYFIINGSEKVLI
AQERSAANIVQVFQKSLPSPTPYVAEIRSALEKGSRLISQMSIKLFSKGDGGRGGFGQTI
KSTLPYIRADVPIAVVFRALGVVSDEDILNHICYDRNDTQMLEMLKPCIEEAFVIQDREV
ALDFIGKRGQNSTLTRDKRVKYARDIMQKELLPHISQSEGSETRKAFFLGYMVHKMLQCA
LGRRETDDRDHFGKKRLDLAGPLLAKLFRGLFRRLTSDVYKYLKLCVENNKEFNLALGVK
ATTMTNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKIA
KPRQLHNTHWGLVCPAETPEGQACGLVKNLALMCYVTVGTPSDPIIEFMIQRNMEVLEEY
EPLRSPNATKVFVNGVWVGVHRDPGHLVKTVQHLRRSHLISHEVSLIRDIRDREFKIFTD
AGRVCRPLFVVDNDVESPNKGNLVLNKDHIRRLEEDQHLHANTDPALKDELYFGFQGLIN
EGVVEYVDAEEEETIMIVMTPEDLDISRQIQAGYKIRPDNSGDLNKRVKAPVNPTAHIWT
HCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNYDVRMDTMANILYYP
QKPLATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGIFRSLFYRAY
TDQEKRIGMNALESFEKPYRNDTMKLKQGTYDKLDEDGLVAPGVRVSGDDIIIGKTAPLP
ADSQDFGIRNKAHTKRDASTPLRSTENGIVDQVLLTTNSEGQKFVKVRMRTTKIPQIGDK
FASRHGQKGTIGITYRHEDMPFTCQGIVPDLIINPHAIPSRMTIAHLIECQLSKVSTLRG
LEGDATPFTEVTVDSVSKLLRNHGYHSRGFEIMYHGHTGRKMMAQVFLGPTYYQRLRHMV
DDKIHARARGPLQILTRQPVEGRARDGGLRFGEMERDCMISHGAASFLKERLFEVSDAFR
VHQTLNPILRMQTMQEQDQDLANPHAIRREAALPRTGVDEYRSSDVHHEIWDFSSLGGCE
RGCKNV
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaataccaggatgattacgagtacgagcaggaggaagaccaatttgaggag
gaggaggaggatgacggcattactgctgaggactgctggatggtcatctcctctttcttc
gaagccaaaggcttagtttcgcaacaggtcgactccttcgacgagttcgtctctacgact
atgcaggagctggtggaagaaaattcccagctcacccttgaccagaataaccccccgtct
gcggacgaaaatccgatcgccctgcgtcgatacgaaatcaagtttggtactgttctactc
tcgagaccagcgatgacagaaggcgatggaaccactcaagtcatgctgccccaggaggcc
cggttgcgaaacctcacatactcgagtcctctctacctcgagatgacaaagaatgtttcg
gttgccgtagagcgcaatgttcccctcaacgagctcgatgacgagcaagaagcagaaatg
gcagctaccgggatccatccaacgcgcctagtttgggaagacgaggatgggagggaggcc
ggcccggacaagattgagccaactccggaccgagtatttattggaaagttgccgatcatg
ctcaagtcgaagtactgcatattgaaagaccttgacgaggatgatctttatgcttggaac
gagtgcccatacgatcaaggaggatatttcattatcaacggctccgagaaagtcctgatc
gcacaagagcgcagtgccgccaacattgtgcaggtgttccaaaagtcgctccccagtccg
acaccgtatgtcgcagagattcgaagtgctctcgagaaaggctcgcgcctcatctcgcag
atgtccatcaagcttttttcgaagggtgacggtgggagaggtggtttcggtcaaaccatc
aagtcgacattgccatatatcagagccgatgtcccaatcgcagtggtcttccgtgccctt
ggtgtcgtctccgacgaagacatcttgaaccatatctgctatgatcgcaacgatacccaa
atgctggagatgctcaagccatgtatcgaggaagctttcgtcatccaggatcgcgaagtc
gctttggatttcattgggaagcgtggacaaaattcaactctgacccgtgacaagcgtgtc
aagtatgctcgcgacataatgcagaaggagctgcttccgcacatctcgcaatcggagggc
agtgagacccggaaggctttcttcttgggatacatggtccacaagatgcttcagtgcgcc
cttggacgtcgggagactgatgaccgagatcattttggaaagaagcgcttggatcttgct
ggtcctcttctagcaaagcttttccgtggcctgttccgcagattgacctcagacgtctac
aaatacctgaagttgtgcgttgagaacaacaaggagttcaatctcgcgcttggtgtcaag
gctaccacaatgacgaacggactcaagtactcgctggctactggtaactggggcgaccaa
aagaaggccgcgagctcgaccgccggtgtctctcaggttctcaacagatacactttctcc
tccacgctttcccacctacgtcgcacgaacactcctatcggtcgtgacggtaagattgcg
aagcctcgtcaacttcataatacccattggggcttggtatgtccggccgagactcctgaa
ggccaagcctgtggtctggtgaagaacttggcactcatgtgctatgttacggtcggtaca
cccagcgatcccatcatcgagttcatgattcaacgtaacatggaagttctggaggaatat
gagcctttaaggtcccccaatgctaccaaggtctttgtcaacggtgtatgggttggcgtt
catcgcgacccgggccatctcgtcaagacagtccagcacttaagaagatcacatctgatc
tctcacgaagtctccttgattcgtgatattcgagacagagaattcaagatcttcacggat
gctggacgagtttgtagacctctctttgttgtggacaacgacgttgagagccccaacaag
ggcaacctggtactcaacaaagaccacatccgaagattggaagaggatcagcacctccat
gctaacacggacccggcgctcaaggatgagctttacttcggcttccagggcctcatcaac
gagggtgtggtcgagtatgttgatgccgaggaagaggagacgatcatgattgtcatgacg
ccagaggatctggatatctcgcgccaaatccaggccggttacaaaatccgccccgataat
agcggagatctgaacaagcgtgtcaaggctccagtgaaccctacagcacacatttggact
cactgcgaaatccatccgagtatgatactgggaatatgtgcaagcattattccattccca
gatcataaccaatctcctcgtaatacctaccagtctgccatgggtaagcaagctatggga
gtcttcctcacaaactacgacgtgagaatggacaccatggcgaacattctctattaccct
cagaagccccttgcaaccactcgctctatggagttcctgaaatttcgagaacttcctgca
ggtcaaaatgccattgtcgctattgcttgttactccggttacaaccaagaagattcggtc
attatgaaccagagtagtattgatcgtgggattttccgaagtttgttctaccgtgcctat
accgatcaggagaagcgcattggcatgaacgccctggaatcattcgagaagccctacaga
aatgacaccatgaaactaaaacaaggtacatatgacaagttggatgaggacggacttgtc
gctccgggtgttcgtgtgtcaggagacgatatcatcattgggaagacagcgccattgccg
gcagacagccaggattttggaatacgaaacaaggcccatactaagcgcgatgcatcaaca
cctctgaggagtactgaaaacggtatcgtcgaccaggtcctccttaccaccaactccgag
ggtcagaagttcgtcaaggttcgtatgagaacaaccaagattccccagattggtgacaag
tttgcctctcgtcacggacagaagggtaccattggcatcacataccgtcatgaggatatg
cctttcacgtgccagggtatcgtgcccgatttgattatcaacccccacgccatcccttcc
cgaatgacaattgcccatttgatcgagtgtcagctgagtaaggtctcgactcttcgcggt
ctcgagggagacgctacgccattcacagaagttacggtggactcggtttccaagcttctc
cgaaaccatggataccactctcgtggttttgagatcatgtaccacggacacactgggaga
aagatgatggctcaagtcttcttgggtccaacctactaccaacgtctccgccacatggtc
gacgacaagattcatgctcgcgcccgaggacccctccagatcctgactagacagccggtg
gaaggtcgtgctagggatggtggtctgcgtttcggagaaatggagcgtgattgcatgatt
tctcacggagccgcttcattcttaaaggagagattgtttgaggtgtcggatgccttcaga
gtccatcaaactctcaacccaatccttcgaatgcagaccatgcaagaacaagaccaagat
ctcgcaaatccacatgccatacgccgcgaagctgctcttccaagaactggcgtcgatgaa
tatcgcagctcggatgttcatcacgagatctgggatttcagttcgctaggaggctgcgag
agggggtgtaagaatgtatag
DBGET
integrated database retrieval system
