KEGG   Drepanopeziza brunnea: MBM_04801
Entry
MBM_04801         CDS       T03105                                 
Name
(RefSeq) RNA binding protein
  KO
K12881  THO complex subunit 4
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03013  Nucleocytoplasmic transport
mbe03015  mRNA surveillance pathway
mbe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MBM_04801
  09122 Translation
   03013 Nucleocytoplasmic transport
    MBM_04801
   03015 mRNA surveillance pathway
    MBM_04801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbe03019]
    MBM_04801
   03041 Spliceosome [BR:mbe03041]
    MBM_04801
Messenger RNA biogenesis [BR:mbe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     MBM_04801
    TREX complex
     MBM_04801
Spliceosome [BR:mbe03041]
 Complex C
  Other components
   EJC/TREX
    MBM_04801
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MBM_04801
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 18760736
NCBI-ProteinID: XP_007292690
UniProt: K1XWU8
LinkDB
Position
Unknown
AA seq 292 aa
MDRALDEIVAERQLIQRREVVAVPVEDAVEAPETYAVNATTILVMAEWVHDKFDNDTGRR
PNRPDRRYTPDPVYDAVSSKLRVENLHYDLLEEDLEDLFNTIGPVINLTLTYDRAGRSEG
VAYVTYETASDAKKAIREFDGANAKGQPIRLIPVPSGPSSRRGPPPQSRSLFERMGAPKR
SRSDSPIRHSDVRRPPPSNVDRYVPGGTRSRSRSPRPRRRDGRRPGARRERGERTGAVRG
GGERLARDGRPKKTQEELDAEMEDYFGGGSKDNVDPGPAAAATTGDDIDMIE
NT seq 879 nt   +upstreamnt  +downstreamnt
atggatcgcgcactcgatgagatcgtcgccgaacgccagctaatacagcgtagagaggtg
gtggccgttcccgtggaggacgccgtggaggccccagaaacgtacgcagtgaacgcaacg
actatcctcgtgatggcagaatgggttcacgataagtttgacaacgataccggacgccga
ccaaatcgccctgatagaagatacacgccggaccctgtctatgatgctgtgtcttctaag
cttcgggttgaaaatctacactacgatttgttggaggaggacttggaggatctattcaac
accatcggtcccgtcataaatcttacgctcacctacgaccgtgctggccgttcagaaggt
gtcgcatatgtcacctacgaaaccgcatccgatgccaagaaggcaatccgggagtttgac
ggagcgaacgcaaagggacagcccatacgtttgatcccagtcccgtcaggcccctccagt
cggcgaggacccccaccacagtcccgctctctgttcgaacgcatgggtgcgccaaagaga
tcccgctctgattctccaatccgccattctgatgtcagacgtcccccgcccagcaacgta
gatcgctacgttcctggaggtactcgcagccgctcccgcagtcctcgcccccgcagaaga
gatggtcgacgacccggtgccagacgtgagagaggagagagaactggagcagttcgtggt
ggtggagagcgtcttgcccgtgatggaaggcccaagaaaactcaggaggagctcgatgca
gagatggaggactactttggtggaggatcgaaggataacgtagatcctggaccagctgct
gccgccactacgggtgatgacatcgatatgattgaatag

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