KEGG   Drepanopeziza brunnea: MBM_05014
Entry
MBM_05014         CDS       T03105                                 
Name
(RefSeq) WD repeat protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03420  Nucleotide excision repair
mbe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MBM_05014
  09124 Replication and repair
   03420 Nucleotide excision repair
    MBM_05014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mbe04121]
    MBM_05014
   03400 DNA repair and recombination proteins [BR:mbe03400]
    MBM_05014
Ubiquitin system [BR:mbe04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     MBM_05014
DNA repair and recombination proteins [BR:mbe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      MBM_05014
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_C Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_EML WD_LRWD1 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 18760949
NCBI-ProteinID: XP_007292903
UniProt: K1WG85
LinkDB
Position
Unknown
AA seq 470 aa
MNQLLFDRSTGNLSPRGFARIQTSQLIQSIQLAPRLKFNGGEKEIASVQGAQGDGSRLVS
LQPEEVAGSNKIWAHQSGVNALAIDVENRLLISGGSDSSIKLWNLDEHVPWSNHTFKPFQ
TVPRTSLTHKFGITQLSFYPFDSGAFLSTSYDHHLKLYATDTLSVSAQFDLNSIVYNHAL
SPIANHLLVACATQHPAVRLVDLRSGSSIHSLAGHHGALLSLSWSPTIEHVLASAGIDGT
VRLWDIRKSSGALGVLDMEDSTGITDTDGMGGGDRSRESGKSHSAAVNGLTWTGDGSYII
SAGHDNRVRVWDAATGANTLASFGPTLKNGHLSNLPLVVSPTGSTEPRKEVLFYPNEKEL
LMFELHEGRLSKRCRVPGPNIAAVRSRTGERNVKSRITGLVFRGQAGGIYSAHTDGQIRA
WLPRSREDDELDEEEELERSYENNDEMTKKKRKVLDEIFRDLTKQKITFG
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaatcagttgctgtttgacagatcaacgggcaatctcagtcctcggggatttgcccgt
atacaaacctcgcaactgatccaatccatccaacttgccccgagactgaaatttaatggt
ggcgaaaaggagatagcatctgttcaaggtgcccaaggtgatggctctcggctagtgtct
cttcagcctgaagaggtagctgggtctaataagatatgggcccatcagtctggagtcaac
gctctggcaatagatgttgagaaccgacttcttatttcaggaggttcggactccagcata
aaactttggaaccttgatgagcatgtaccgtggtcaaaccacacattcaagcccttccaa
accgttcctagaacttctttaacccacaaatttggcatcactcagctaagcttttatcct
tttgactctggggcgttcctttctacttcgtatgatcaccacttgaagctgtacgcaaca
gacacactttctgtaagcgcacagttcgacctgaattctatcgtttacaaccatgcgctt
tctcccatagcaaaccacctgctcgttgcctgtgcaacccagcatccagctgtcaggctt
gttgatcttcgttccggctcaagtattcattcgctggctgggcatcacggggctttgcta
tctctctcgtggagtccgactattgaacatgttctagccagcgcaggtatagatgggacc
gtccgtctatgggacattcgcaagagctcaggggcgttaggtgtattggacatggaggac
tcgacgggtatcactgatactgacgggatgggaggaggcgatcgatccagagaatccggc
aaatcccattccgccgctgtaaatggtctcacttggacaggcgatggctcttatatcatc
tcagccggtcatgacaatcgcgttagagtctgggatgcagctacaggagccaacacactt
gcaagttttgggccaacgctgaagaatggtcatctctcgaatcttccgttggttgtgagc
cctactggatccactgagcccaggaaagaagtccttttctatccaaatgaaaaggaactt
ctcatgttcgagttacatgagggccgcctttctaagcgttgccgtgttccaggtccaaat
atagcagccgttaggtcgaggacaggagagagaaacgtcaaaagcaggatcacaggactg
gtcttcagaggccaagcaggtggcatttactctgcccacacagatggacagatccgtgct
tggctgcctcgaagtcgggaagatgatgaactggacgaagaagaggaactggaacgaagt
tatgaaaacaacgatgagatgacgaaaaagaagcgaaaagtcctggatgaaattttcagg
gatttgacgaaacagaagataactttcggatga

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