Drepanopeziza brunnea: MBM_05014
Help
Entry
MBM_05014 CDS
T03105
Name
(RefSeq) WD repeat protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03420
Nucleotide excision repair
mbe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MBM_05014
09124 Replication and repair
03420 Nucleotide excision repair
MBM_05014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mbe04121
]
MBM_05014
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_05014
Ubiquitin system [BR:
mbe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
MBM_05014
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
MBM_05014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD_LRWD1
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
18760949
NCBI-ProteinID:
XP_007292903
UniProt:
K1WG85
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MNQLLFDRSTGNLSPRGFARIQTSQLIQSIQLAPRLKFNGGEKEIASVQGAQGDGSRLVS
LQPEEVAGSNKIWAHQSGVNALAIDVENRLLISGGSDSSIKLWNLDEHVPWSNHTFKPFQ
TVPRTSLTHKFGITQLSFYPFDSGAFLSTSYDHHLKLYATDTLSVSAQFDLNSIVYNHAL
SPIANHLLVACATQHPAVRLVDLRSGSSIHSLAGHHGALLSLSWSPTIEHVLASAGIDGT
VRLWDIRKSSGALGVLDMEDSTGITDTDGMGGGDRSRESGKSHSAAVNGLTWTGDGSYII
SAGHDNRVRVWDAATGANTLASFGPTLKNGHLSNLPLVVSPTGSTEPRKEVLFYPNEKEL
LMFELHEGRLSKRCRVPGPNIAAVRSRTGERNVKSRITGLVFRGQAGGIYSAHTDGQIRA
WLPRSREDDELDEEEELERSYENNDEMTKKKRKVLDEIFRDLTKQKITFG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttgctgtttgacagatcaacgggcaatctcagtcctcggggatttgcccgt
atacaaacctcgcaactgatccaatccatccaacttgccccgagactgaaatttaatggt
ggcgaaaaggagatagcatctgttcaaggtgcccaaggtgatggctctcggctagtgtct
cttcagcctgaagaggtagctgggtctaataagatatgggcccatcagtctggagtcaac
gctctggcaatagatgttgagaaccgacttcttatttcaggaggttcggactccagcata
aaactttggaaccttgatgagcatgtaccgtggtcaaaccacacattcaagcccttccaa
accgttcctagaacttctttaacccacaaatttggcatcactcagctaagcttttatcct
tttgactctggggcgttcctttctacttcgtatgatcaccacttgaagctgtacgcaaca
gacacactttctgtaagcgcacagttcgacctgaattctatcgtttacaaccatgcgctt
tctcccatagcaaaccacctgctcgttgcctgtgcaacccagcatccagctgtcaggctt
gttgatcttcgttccggctcaagtattcattcgctggctgggcatcacggggctttgcta
tctctctcgtggagtccgactattgaacatgttctagccagcgcaggtatagatgggacc
gtccgtctatgggacattcgcaagagctcaggggcgttaggtgtattggacatggaggac
tcgacgggtatcactgatactgacgggatgggaggaggcgatcgatccagagaatccggc
aaatcccattccgccgctgtaaatggtctcacttggacaggcgatggctcttatatcatc
tcagccggtcatgacaatcgcgttagagtctgggatgcagctacaggagccaacacactt
gcaagttttgggccaacgctgaagaatggtcatctctcgaatcttccgttggttgtgagc
cctactggatccactgagcccaggaaagaagtccttttctatccaaatgaaaaggaactt
ctcatgttcgagttacatgagggccgcctttctaagcgttgccgtgttccaggtccaaat
atagcagccgttaggtcgaggacaggagagagaaacgtcaaaagcaggatcacaggactg
gtcttcagaggccaagcaggtggcatttactctgcccacacagatggacagatccgtgct
tggctgcctcgaagtcgggaagatgatgaactggacgaagaagaggaactggaacgaagt
tatgaaaacaacgatgagatgacgaaaaagaagcgaaaagtcctggatgaaattttcagg
gatttgacgaaacagaagataactttcggatga
DBGET
integrated database retrieval system