Drepanopeziza brunnea: MBM_05212
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Entry
MBM_05212 CDS
T03105
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MBM_05212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbe03041
]
MBM_05212
03009 Ribosome biogenesis [BR:
mbe03009
]
MBM_05212
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MBM_05212
Spliceosome [BR:
mbe03041
]
Complex A
U2 snRNP components
U2 related factors
MBM_05212
Complex B
MBM_05212
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
MBM_05212
Ribosome biogenesis [BR:
mbe03009
]
Eukaryotic type
90S particles
Helicases
MBM_05212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
SRP54
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_23
Motif
Other DBs
NCBI-GeneID:
18761147
NCBI-ProteinID:
XP_007293101
UniProt:
K1X7X4
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MTDRRPDQQEMSKSKRVKTDGLDPRANPYLAHNYEEESFYSAHDGNSNGNGARTGLSEFK
RHATTAVQAHKAEDGPNNPFNNAPLSNQYFNILKTRRDLPVHKQRQEFLDMFHKTQILVF
VGETGSGKTTQIPQFVLFDDLPHFNGKLVACTQPRRVAAMSVAQRVANEMDVRLGEEVGY
SIRFEDVTGPKTVLKYMTDGMLLREAMHDHNLTRYSCIILDEAHERTLATDILMGLLKEV
ALRRPDLKIVIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAALRTV
LQIHATEPEGDVLLFLTGEEEIEDACRKIALEADEMIRETDAGPLKVYPLYGTLPPAQQQ
RIFEPAPPPSRPGGRPGRKVIVGTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLL
VSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLANTVLELKKL
GIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGDLTALGKLASEFPLDPALAVMLIS
SPEFYCSNEILSLTALLSVPQIFVRPASAKKRADEMKALFAHPDGDHLTMLNVYHAFKGP
EAQRDVKGWCHTHFLSLRALQSADNVRQQLKRIMEKSELDLVSTPFDDKEYYTNIRRALV
AGFFMQVAKKDPSGKTYKTVKDDQSVLLHPSTVLGVDSEWVIYNEFVLTTKNYIRNITTV
RPEWLLDIAPTYYDLSTFAKGEIRTSLQRTMEKVKRKQAMKGGR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgtcgtccagatcagcaagagatgtccaaatcaaagcgggtcaagactgat
ggtctcgacccaagggccaatccgtacctggcgcataattacgaagaggagagtttctac
tcggcgcatgatggcaatagcaatggcaatggtgctcgcacaggactgtccgaatttaag
agacatgctacgacggctgtacaggcacacaaggccgaagatggacccaataaccccttc
aacaacgctcctctatcaaaccaatacttcaacatcctcaagacgagacgagatcttcct
gttcacaagcaaagacaagagtttctcgatatgttccataagacccaaatccttgtattc
gttggagagactggttccggaaagactacccagatcccacagttcgtactcttcgacgac
ctaccccatttcaacggaaagctcgtcgcatgtacacaaccccgtcgagttgctgctatg
tcggtcgctcagcgtgtggccaatgagatggatgtgcggcttggagaggaggtcggatac
agtattcgattcgaggatgtcactggaccgaagacggtgctcaaatatatgactgatggt
atgcttctgagagaagctatgcacgaccacaacttgacaagatatagctgcatcattctc
gatgaggctcatgaacggactctggcaaccgatatcctgatgggtttgctgaaggaggtt
gcgttgagacgcccagatctcaagattgttatcatgtctgctacgcttgatgcacagaag
ttccagcgctatttcaacgatgcgccccttcttgccgttccgggaagaacacaccccgta
gagatcttttacacgccagagcccgagcgagactatgttgaagctgcgctacgaacagtt
cttcagattcacgccaccgaacccgaaggagatgtgttattgttcttgacaggagaagag
gagattgaggacgcatgtaggaaaattgctcttgaagcagatgagatgatcagagagaca
gatgctggaccattaaaggtctaccctctgtatggtactctgcctcctgcgcaacaacaa
cgaatcttcgagccagcaccaccaccatcaagacctggaggtcggcccggacggaaggtc
atcgtaggaacgaatattgcagaaacctccttgacgattgacggtattgtttatgtggtg
gacccaggtttcagcaaacagaaagtctacaacccacgtattcgagtagagtcccttctg
gtctcgcctatctctaaggcttcggcgcaacaacgagctggtcgtgctggtcgtactcga
cctggaaagtgtttccgtttgtacaccgaagctgctttcaagaaggaattgatagagcaa
acataccccgagattcttcgatcaaatctggcaaacacggtcctggaactgaagaaactt
gggatcgatgacttggtacactttgatcttatggatccgccagctccagagacgcttatg
cgagccctcgaagagctcaattaccttgcctgtctcgacgatgatggagatctgactgct
ctcggcaaacttgcctccgagtttccccttgacccagcgctcgctgtcatgctcatctcc
tccccagagttctactgctccaacgaaattctctcgctcaccgccctcctatccgtccct
caaatcttcgttcgcccggctagcgcaaagaaacgcgcagatgaaatgaaagccctcttc
gcacacccagacggcgaccacctcaccatgctcaatgtttaccatgcattcaagggcccc
gaggcgcagagagatgttaaaggctggtgccacacacatttcctcagtttgcgagccctc
cagtccgccgacaacgttcgccagcaactgaagcggatcatggagaagtctgaattggac
ttggtcagcacacctttcgacgataaggaatactacaccaacatccgccgagcacttgtc
gctggtttcttcatgcaggttgcgaagaaggacccctctggaaaaacttacaagactgtg
aaggacgaccagagcgttctgctccatcctagcacggttcttggcgtcgatagcgagtgg
gttatctataacgagttcgtgcttaccaccaagaactacatccgcaacatcaccactgtc
agacctgaatggctcttggacatcgcacccacttactacgatctctccaccttcgcgaag
ggagaaattaggacctctctccagcgaacaatggaaaaagtcaagcgcaagcaagcaatg
aaaggcggacgatag
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integrated database retrieval system
