Drepanopeziza brunnea: MBM_05426
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Entry
MBM_05426 CDS
T03105
Name
(RefSeq) ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mbe
Drepanopeziza brunnea
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_05426
03041 Spliceosome [BR:
mbe03041
]
MBM_05426
03036 Chromosome and associated proteins [BR:
mbe03036
]
MBM_05426
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MBM_05426
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MBM_05426
mRNA cycle factors
Common to processing body (P body) and stress granule
MBM_05426
Spliceosome [BR:
mbe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MBM_05426
Chromosome and associated proteins [BR:
mbe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
MBM_05426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18761361
NCBI-ProteinID:
XP_007293315
UniProt:
K1WUQ2
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MAEQLNMSGLNINSGDARGASSYIPPHMRGKVGGPGPGGPPAGGPPINPGINGSAWAGPS
GRGGPPPGGNWAGAPEFTPGAGGPPPAGRGGGGWDNYSEPKHFNRNGYGNPGAGGASGGG
GSAPPRGGGDGQWRDGKHIAGPVNLRLERELFGIADDPSKQQTGINFEKYDDIPVEASGS
DVPEPVLRFTNPPLDDHLIRNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGG
FLFPILSQAFLTGPSAVPAGASNNFRQRKAYPTSLILAPTRELVSQIFDESRKFAYRSWV
RPCVVYGGADIGSQLRAMERDQKCCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRM
LDMGFEPQIRRIVEGEDMPGVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTS
ENITQKVEYVEDPDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQNFPATSIHG
DRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTG
RAGNTGISTAFFNRGNRGVVRDLIELLKEANQEVPAFLENIARESSFGGGGGRGGRSGGG
RGRGGGANRDFRKFGGGGGGPSYGGGGGYGGNSSYGGGGGGSGYGGPPPAPYGGGGNPAY
NGGGGGGSGGYGGGSYGNPSGGGGGQSWW
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaactgaacatgagcggattgaacatcaactcgggtgatgctcgcggtgcc
agctcgtacatccctccccacatgcgtggaaaggttggcggtcctggtcctggtggccct
cctgccggtggtcctcccattaaccctggtattaatggcagcgcttgggctggtccaagt
ggcagaggcggtcctccccccggtggaaactgggctggggctcccgagttcactcctggt
gctggaggccctcccccagctggacgtggcggcggtggatgggacaactactctgagcca
aagcacttcaaccgaaatggatacggaaacccaggcgctggtggtgcgtcgggcggtggc
ggctctgctcctcctcgtggcggcggtgacggacaatggcgcgacggaaagcacattgct
ggacccgtgaacctccgtctcgagcgtgagctttttggtattgcagatgacccttccaag
caacagaccggtatcaactttgagaagtacgatgacatcccagtcgaggcttctggttcc
gatgtcccagagcctgtcttgagatttaccaaccctcctctcgacgaccatctgattcgg
aacatcgagttggctcattacaaggtcccgaccccagtccagaagtactcgatccctatc
gtcatgggtggtcgtgacctcatggcttgcgcccagaccggttcaggaaagactggtgga
ttcttgttcccaatcttgtcccaagcctttcttacaggtccttcagcagttcctgctgga
gccagcaacaacttccgccaacgcaaggcctaccccacctccttgatcctggcccctacc
cgtgagcttgtctcccagatcttcgacgagtctcgcaagttcgcttaccgttcctgggtt
cgtccttgcgttgtgtacggtggtgccgatattggatcccaacttcgtgccatggagcgt
gaccaaaaatgctgtgatcttttggtcgccactcctggtcgtctcgtggacttgattgaa
cgtggtcgcatctccctgtgcaacatcaagtatctggttctcgatgaggctgatcgtatg
ttggacatgggtttcgagcctcaaatccgccgtattgtggagggtgaagatatgccaggt
gtccaaaaccgtcaaacacttatgttctctgccaccttcccccgcgatatccagatgttg
gcccgtgatttcctgaaggactacgtcttcttgtctgttggacgtgttggttctacttct
gagaacatcacacaaaaagtcgagtacgttgaggatccggataagcgatctgtcttgctc
gacattctccacacccatggtgctggacttaccttaatcttcgttgagacaaagcgtatg
gccgactcgctctccgacttcttgatcaatcagaacttcccagcaacctcgattcacggt
gaccgtactcaacgtgagcgtgagcgtgcactggagatgttccgtaacggccgctgccca
atcttggttgctaccgctgtcgctgctcgtggtctggatatccctaacgtgacccatgtc
gtcaactacgatcttcctactgacatcgatgactatgtccatcgtattggtcgtactgga
cgtgccggaaatacaggaatctctaccgctttcttcaaccgtggtaatcgtggtgtcgtt
cgtgacctgattgagcttctcaaggaggccaaccaggaagtccccgctttcctcgagaac
attgctcgtgagagctcgtttggtggcggcggtggccgtggcggacgctccggaggtgga
cgtggtcgtggcggcggagccaaccgcgatttccgcaaatttggtggtggaggtggcggt
ccatcttacggcggtggtggtggatacggcggtaattcttcgtacgggggtggtggaggc
ggttctggctatggtggtcctcccccagctccttacggtggaggtggtaatcctgcttac
aatggtggtggaggtggtggatcaggcggatacggtggcggctcctacggaaacccatcc
ggaggtggcggcggccaatcctggtggtaa
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