Drepanopeziza brunnea: MBM_05915
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Entry
MBM_05915 CDS
T03105
Name
(RefSeq) dead box ATP-dependent rna helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MBM_05915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbe03041
]
MBM_05915
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MBM_05915
Spliceosome [BR:
mbe03041
]
Complex A
U2 snRNP components
U2 related factors
MBM_05915
Complex B
MBM_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
18761850
NCBI-ProteinID:
XP_007293804
UniProt:
K1XTK9
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MARHKDSRSPSPAGSQHSSKRIKREEDVRRDRDRRDEVRPQRRRSRSRSLDRRHRDRDIH
RRRDRSLDRREEDYHRSGRRDRSRDRRDRFDRERSPDRRRRRSRERDYRERRDESYDKAR
RRRENSTDSRPRSRGDGNFGKPSGKSDNVRSSEPVKPSAPPVQTEAEKKAERQKKLEAWK
KKMAEDKERREQELAAGGTRKLLDEIDQKAAASTAIGSPASPGTPTSSAPPAPYAGKFDP
KAIAKKAVASSTSANTLGKDLPLNELTKASATLTSVKGLQADKKITALSSTSQGKVLIPV
IKDQRLADIAMIASALPKARANLNAFGLGAKSAFDNEKPTSTKRALDFGEDEDARKKLEK
LPTLPLANLENDDAALANGAEGEDDDDDVNMEDAGTEEEAAAAARAAAEKRSLANMEEPT
DESVKTVPHGDVNTEQSKAMQPEQTPMEEQDEVDPLEAFMDELGDPFSAPKPTNSFNRSQ
SKSQKREPEPLFGDDEVDLKAVEADPDDILAMASKARKKKDLPTVNYAKLDLEPVRKNFY
AEPAELADMTEAELADLRLELDGIKVAGKDVPKPVQKWSQCGLNVQSLEVIRKLGYERPT
AIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLEGSDGPVGLIVTPTRE
LATQIHKECKPFLKAMGLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANSGR
VTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANIRPDRQTILFSATMPRIMDALAKKTLQ
SPVEITVGGRSVVAPEITQLVEVREEKQKFHRLLELLGELYNNDEDARTLIFVDRQEKAD
DLLKDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVN
FDAPNHLEDYVHRAGRTGRAGAKGTAVTFITEDQEQYSVGIAKALEQSGQPVPERLNEMR
KSFRDKVKTGKSKDSSGFGGKGLERLDAEREAARNRERKTHKTDGDDDEEKEDKTSDEEI
LLKAASTVQPASTAAAPQLHGVPKGIDLDGKITVHRTETAVSSGGGSKNPLDKVTSAIDA
INARLNKTGQLRSGVPIDNKGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTS
ITTKGSFYPAGKEVQAGGDPKLYILVEGDTEVVVTNAMRELMRLLKEGTMAAADAEGRAP
ASGRYTVT
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcacaaggactctcgctcaccatcgccagcaggaagccagcactcctcgaaa
cgaatcaaacgggaggaagatgtcagaagagatcgggataggagagatgaggtccgccca
cagcggcggcgaagtcggtcgcgaagcctcgaccgtcgccaccgagaccgtgatatacac
agacgcagagatcgatcactagaccgcagagaagaagattatcatcgctccggaagacga
gaccgatcaagagatcgacgagaccgattcgaccgggaacgctctccagatcggcgacgg
cgcagaagtcgcgagcgggactatcgagagaggcgagacgaatcttatgacaaggcacga
aggcgccgcgagaattctactgactcgaggccccgtagcagaggtgatggcaattttgga
aaaccatccggtaaatcggataatgtcagaagcagcgaacccgtaaagccatcagccccc
cccgtgcagaccgaggccgagaagaaggccgaacgccaaaagaagctggaagcatggaag
aagaagatggcagaggacaaggaacgaagagagcaagagcttgcagctggaggtacccgc
aagctcttagacgaaatcgatcaaaaagccgctgcctccactgcaattgggtctccagcc
tcaccaggaacgccgacgagctctgcaccacccgctccttatgccggtaaattcgatcca
aaagcaatagcaaagaaagctgtggccagctcgacttctgcaaacactctgggcaaggat
ctaccgctcaacgagctaaccaaagcgtccgctaccttaacctcagtgaaaggactacaa
gctgacaagaagatcacagccctcagcagtacatcccaaggtaaagttttgataccagtg
attaaagaccaacgccttgctgacattgcgatgatagcatctgcattgcctaaggcaagg
gcaaatctcaatgcattcggacttggtgcgaagtctgcctttgacaacgagaagccgact
tctactaagcgagcgttagatttcggggaagatgaagatgcgaggaaaaaactagaaaag
ctaccaaccctacctctagcaaatctcgaaaatgatgatgctgcgctcgctaacggtgct
gagggagaggacgacgacgacgatgtcaatatggaagatgcaggaaccgaagaagaagct
gccgctgctgcccgcgctgctgcggagaagcgaagtctggccaacatggaagagcctacg
gatgaatctgtgaagaccgttccgcatggtgatgtcaacacggaacagtctaaagctatg
cagcctgagcagacaccaatggaagagcaggatgaagtcgatccactagaggcgtttatg
gatgagctaggagatccattttccgcaccgaagcccaccaactctttcaaccggagccaa
agcaagagtcaaaaacgcgaacctgaaccattgtttggcgacgatgaagttgatttaaaa
gcagtggaagcagatcctgatgacatcctcgcaatggcaagtaaggccaggaagaagaag
gacttgcctactgtgaattatgcaaagctggatctggaacccgtccgaaagaatttctac
gccgagccggccgagcttgcagacatgactgaggccgagcttgcggatcttcgcctcgaa
cttgatggaatcaaagtcgccggcaaggacgttccaaaacctgtgcagaaatggtctcaa
tgtggtctcaacgttcagtccttggaagtaattcggaaactgggatacgaacggccgaca
gcgatccagatgcaggctataccagctatcatgtccggaagagatgtgattggtgtagcg
aagactggctctggtaagactatcgcttttttgcttccaatgttccgccacattcgagat
cagcgaccgctggaaggctcagatggcccagtcggcctgatcgtgactccaacacgagaa
cttgctacccagatccacaaagagtgcaaaccgttcttgaaagctatgggcctacgcgct
gtgtgcgcctacggtggagcaccaatcaaggaccagattgccgatcttaagagaggcgcc
gaaattatagtttgcactcctggaagaatgatagatcttcttgctgctaattctggccgg
gttacaaacctacgtcgggttacctacgtcgttttggacgaggccgaccgtatgttcgac
atggggtttgaacctcaggtcatgaagattttcgcgaacattaggccggaccgacaaact
atcctattttctgcgacaatgcctcgcattatggacgcactggcaaagaagacccttcaa
tcccctgttgagatcacagtaggtggaagaagtgttgtcgctccagaaattacccaactg
gtcgaagttcgcgaggagaaacagaaattccatcgtttactagagcttttaggagaacta
tacaacaatgacgaggatgcccgtactctcatattcgtcgacagacaagaaaaggcagat
gatctgttaaaagatctgatgcgcaaaggatatccttgtatgtctatccacggtggcaaa
gaccagatcgatagagactctaccattgatgacttcaaggctggtgttgtgccaattatg
atcgctacctccgttgctgctcgaggcttggatgtgaagcagctgaaactcgtggtcaac
ttcgatgctccgaatcatttggaggattatgttcacagagctggccgaacaggtagggct
ggtgccaagggcacggcagtaacctttattactgaagatcaggagcagtactcggttggt
atcgccaaagctctcgagcaatctggccagcccgtaccggagcgtctcaatgagatgaga
aagtccttcagagacaaagtcaagacaggcaaatccaaagacagctctggctttggtggc
aaaggtttagaacgacttgatgccgaacgggaagctgccaggaatcgggaacggaaaact
cacaagacagacggtgacgatgacgaggagaaagaagacaagactagtgacgaagaaatt
ctactcaaggctgcctctactgttcaacccgcttctacagctgctgcgccccagctgcat
ggagtccccaagggtattgatctggatggaaaaatcacagtccaccgaaccgagaccgca
gtatcatctggaggtggctccaagaacccgttggacaaagtgacttctgctatcgatgct
atcaatgcccgattgaacaagactggccaacttcggtctggtgtcccgattgacaataaa
gggcctgacgctggtgccttccatgccacgctggagatcaacgatttccctcaaaaagca
agatgggctgtcaccaatagaacgaacgtcgccaagattctggaagcaaccggcacgtct
atcaccactaagggcagcttttatcccgccggtaaggaagtacaggcaggtggggatccc
aaattgtatattttggtggagggcgataccgaggttgtggtcaccaacgctatgcgggag
ttgatgagattgctgaaagagggtactatggctgctgcagacgcagaaggcagagcgcct
gccagtggtagatacaccgtcacatag
DBGET
integrated database retrieval system
