Drepanopeziza brunnea: MBM_06848
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Entry
MBM_06848 CDS
T03105
Name
(RefSeq) putative exosome complex exonuclease Rrp6
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_06848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_06848
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
MBM_06848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
TAF2_3rd
NOG1_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
18762783
NCBI-ProteinID:
XP_007294737
UniProt:
K1WRR1
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MEQTQEFKSLQDQVQAALISTTRTTGQISAEDLGFHRTFNPEVGTALDEQSERVLALASA
LLKSATSISDLQAPRLEDADDVETNWRNVVDVVDSLLEKSDTCLDEYTGVIKRKDSTNAE
PSTQVRQLIAPVLFPKAHRLQIPSRFKKQGQGNAYRNQNLLKPQLGFNVKPDNNDDSPWK
PILSAKPHAITPFEKSLNTFTNEFGQLQYCHPYEHEILHLTYPQSIYQKADPIPYLPFET
TSATFVDTEEGVREMLEELKEASEIAIDLEHHDQRSYVGLVSLMQISTREKDWIVDTLKP
WRQNLQVLNEVFADPKIIKVFHGAFMDIVWLQRDLGLYVVGLFDTHHASRALGYSGASLA
FLLKKFIDFDADKQYQMADWRIRPLPAEMFFYARADTHFLLYIFDMVRNELIDRSNSEVP
DENRLEITLQKCKETSLLRFERQVYNTDSGKGPGGWFSQLNKTPSLLSNEQFAVFRAVHG
WRDKIARIDDDSPTFVLPQHAVLTLAKLMPMDMVGVLGLIKSGSHSVKSRAAELLDVIKS
AKAQGKNGPSMIDILRSDKSSSTQSAIPEFKVSAAIAKQAPQTLVAVMDESELRSSNSTF
WGGAFGSSMWDTPDSPRKKAGKNENLRLAVPLPPLSSEIFGTPQGFAEQAEVAQETPLPD
SPPPPPPQVEEAFVLKRGAKRKSEAMSDVEQEGDGEFDISLDIEDEDRKSLKARRRAEKK
ARKAAKKKAAEAAEAVEDNVEEYDEEPFDYSKADSVLHGKKGVDKGGKKSKQKPMDPYVK
SMDAPKGMRRLQTERAGKSHTFKN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggagcagacccaggagttcaagtccttgcaggaccaagtccaagctgctctgatctcc
acgacgcgaactacgggtcagatatccgcagaagatttggggttccatcggaccttcaac
ccagaagtcggcactgctcttgacgaacaaagcgaacgcgtacttgctctggccagcgcg
ttgctcaaatcggcaacttcgatatcagatctacaggcgccgaggttggaggacgcggat
gatgtggagacaaattggcgcaatgtggtggacgttgttgattccttgctagagaagtcc
gacacctgcctcgacgaatatactggggtgatcaagcgcaaggattccaccaatgctgag
ccatctacccaggtgaggcagcttatagccccagtgctatttccaaaagctcaccgtttg
cagataccatcaaggtttaagaaacaagggcaaggaaatgcttacagaaatcaaaatctg
ctcaagccccaactcggcttcaacgtcaaaccagataacaacgacgactcgccctggaag
cctatcctctccgcgaagccacatgccatcaccccctttgaaaagagtcttaataccttc
acaaacgaatttggacagttacagtattgccatccttacgagcatgagatcctacacctg
acatatccacaatccatataccaaaaagcagaccccattccctacctacccttcgagaca
acctctgcgactttcgttgataccgaagagggtgtgcgagagatgctcgaggagctcaag
gaagcctctgaaatagcaattgatcttgagcaccatgaccagagatcatacgtgggcctg
gtttctttgatgcaaattagcactcgggaaaaggattggatcgtggatacactgaaacct
tggagacagaacttacaagtactcaatgaagtctttgctgacccaaagatcatcaaagtc
ttccatggagctttcatggacattgtatggcttcaacgggatcttggtctctatgtagtt
ggactgttcgatacgcaccatgcgagcagagctttgggctattctggggcgagtctggca
ttcctactcaaaaaattcattgattttgacgccgacaagcaataccaaatggccgactgg
aggatccgaccactgccagctgagatgttcttctacgccagagctgatacgcacttcctt
ctgtacatattcgatatggtccgcaacgagctaattgataggtcaaattcagaagtacca
gacgagaacagactagagatcacgcttcaaaaatgcaaggaaacttctcttcttcgcttt
gagcgccaagtctacaacacagacagtggaaagggtcctggaggatggttctcgcaactc
aacaagacgccatctctactcagcaatgagcaatttgccgtcttcagagcggtgcatggg
tggcgggacaaaattgctcgaattgacgacgatagtccgacatttgtgctgcctcaacac
gcagtcttgaccctggcgaagctgatgccgatggacatggttggtgtcctgggacttatc
aaatcaggctcacacagcgtaaagtctcgtgcagctgagctactcgatgtcatcaagtcg
gccaaagcccaagggaaaaacggtccaagcatgatagacattctccgatccgacaaatca
tcctccacccaatctgcaatccctgaattcaaagtttcggctgcgattgcaaaacaggcc
ccacagactttggtcgcagtaatggacgaaagcgaacttcgcagttcgaactcgaccttc
tggggtggtgcgtttggaagcagcatgtgggataccccagattcgcctcgcaagaaggct
ggcaagaacgaaaatctgcgtctcgctgtccctctgccaccattgtcttccgagatcttt
ggtacgccccaaggctttgccgagcaagctgaagttgcgcaagagacgcctcttcctgac
agcccaccaccccctccccctcaagttgaagaagcattcgtcctgaagcggggtgcgaag
cggaagagcgaggccatgtcagatgtcgagcaggaaggcgatggcgaattcgatatatct
ctagatatcgaagatgaagacagaaaatctttaaaggcccgacgcagagccgaaaagaaa
gcacgcaaagcagccaagaagaaggcagcagaggcagccgaggcagtcgaggataatgta
gaggaatacgatgaagagccctttgattacagtaaagccgattcagtgctgcatggtaag
aagggcgtggacaagggcggtaagaagagtaagcagaagccgatggatccttacgtaaag
agtatggatgcgccgaaggggatgaggaggttgcagactgagagggcgggcaagagccat
acattcaagaactga
DBGET
integrated database retrieval system
