Drepanopeziza brunnea: MBM_06949
Help
Entry
MBM_06949 CDS
T03105
Name
(RefSeq) DNA repair helicase rad25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03022
Basal transcription factors
mbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MBM_06949
09124 Replication and repair
03420 Nucleotide excision repair
MBM_06949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_06949
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_06949
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MBM_06949
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MBM_06949
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MBM_06949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-GeneID:
18762884
NCBI-ProteinID:
XP_007294838
UniProt:
K1X1Q1
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MPVKRKAPSSASGSKKAGKDTEASTPGPATPRSISGSDEDYESEVTEEESETVKKAKANL
SVSKYQQKRGSSFLRGRDSASHHFEGGNHDFSYLSLKPDHHNRPLWIDPLKGKIIMESFS
PLATEAQDFLTTVAEPQSRPQFLHEYSLTPHSLYAAVSVGLDPKDIISVLDKLSKVPIPG
SIREFITGCTHSYGKVKLVLKNTKHFVESSDPEMLQRLLKDAVIGPLRVHGTEDITTTSA
PKMGALVIPGTKNAAGVQQAGDQPGKSQQPKDGENANQEDIYAKLNEDDDDEDEADAVHA
FEIADEGVETIQKRCLELGLPVLEEYDFRNDDANANLDIDLRPIAQIRHYQEKSLSKMFG
NGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIILCTSSMSVVQWRQEFLKWCNINPNDI
AVFTSDNKDRFTGNTGIIVTTYNMVAQQGKRSYDSQKMMDFLTSREWGLMILDEVHVAPA
HMFRRVTSIIKTHSKLGLTATLLREDDKISDLNFLIGPKLYEANWMELAEQGHIARVQCA
EVWCPMTTEFYTEYLNQSSRNKSLIWIMNPRKFQACQYLINYHEKRGDKIIVFSDNVYAL
KMYAQKLNKVFIYGETGNTERLRILENFQHNSNINTLFLSKIGDTSLDLPEATCLIQISS
HFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTLEMVYSSKRQAFLVDQGYAFKV
ITHLQGIENLPDLAFTTPAERRELLQNVMIHNEAGGDDYEDGDDLFHRVDGEMGRKKKKK
KGARRTAGNLSELAGGSDMAYVEMNRSRNKDLKKKKGESSAFFKKIQREQVKRKAAMDS
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaagagaaaggctccatcgagtgccagcggcagcaaaaaagccggcaaagac
accgaagcctcgacgcctggtcccgccaccccgcgcagcatcagcggtagcgacgaagat
tacgagtctgaagtgacggaggaggaatcagagacggtcaagaaggcgaaggcgaacctc
agcgtcagcaaataccagcagaagaggggaagttcgttccttagggggcgagactccgcg
tctcaccacttcgagggcgggaatcatgatttttcatacctgtcgctgaagccggatcat
cataatcgcccgctgtggatcgacccgttgaaggggaagatcatcatggagagtttctcg
ccgttggcgacagaggcgcaggatttcttgacgacggttgcggagccccagtccaggccg
cagtttctgcacgagtattctttgacgccgcatagtctttatgctgcggtgtcggttggc
ctggacccgaaggatatcatcagtgtgctggacaagctgtcgaaggtgcctataccgggc
agtatccgcgagttcattacaggatgtacccacagctacggcaaggtcaagctggttctg
aagaataccaagcattttgtggagagttccgacccggagatgttgcagcggctgctaaag
gatgcggtgattgggccattgagggtgcatggcacggaggacatcaccacgacttctgct
cctaagatgggtgccttggtcattcctggtacgaagaacgcggctggtgtacagcaagcc
ggagatcagcctggaaaatctcagcagcccaaggatggcgagaatgcaaaccaggaagac
atatatgccaaattgaacgaggatgatgatgacgaagacgaagccgatgctgtgcatgcc
tttgaaatcgctgatgaaggtgtggaaacgattcagaagcgctgtctagagttgggattg
cccgtcttggaggagtacgacttccgcaacgacgatgcgaatgccaatctcgatattgac
ttgaggcctattgctcagatcagacattatcaagaaaagagcttgagtaaaatgtttggt
aacggtagagccaagagtggtcttatcgttctaccctgcggtgctggcaagactttggtt
gggattaccgctgcttgcacaatcaaaaagggtgttatcattctttgcaccagttcgatg
tccgtggttcagtggaggcaggaattcctgaaatggtgcaatattaaccccaatgatatt
gccgtctttacgtccgacaacaaggataggttcactggaaatactggtatcattgttacg
acatacaacatggttgctcagcagggcaagcgatcgtacgattcccaaaagatgatggac
tttctcacaagcagagaatggggtctgatgattctcgatgaggtccacgtcgcgccggct
cacatgttcagacgagtgacatccatcatcaagacgcactcgaagctaggtctaacagcc
actctgcttcgtgaggacgacaagatcagcgatctgaactttctgatcggacccaagctc
tacgaagctaattggatggagctagcagaacaaggtcacatcgcccgagttcaatgcgcc
gaagtctggtgtcccatgactacagaattctacactgaatacctcaatcaatccagccgt
aataaatctctcatctggatcatgaacccgcggaaattccaagcctgccaatacctcatt
aactatcacgagaagcgtggcgataaaatcatcgtcttctctgataacgtctacgccctg
aagatgtacgcgcaaaagctcaacaaagttttcatctacggcgaaaccggcaataccgag
cgtctgcgtatcctggagaatttccagcacaacagcaacatcaatactctcttcctatcc
aagatcggcgacacgtcgcttgatctccctgaggctacatgcctcatccaaatctcttcg
cattttggctctcgacgtcaagaggctcaacgactgggtcgaattttgagagcgaagcgt
aggaatgacgaaggctttaatgcattcttctactccctcgtctccaaagatacgctcgaa
atggtctactcctccaaacgccaggcctttctcgtcgaccaaggctatgccttcaaagtc
atcactcacctccaaggcattgagaacctgcccgacctcgccttcacgacccccgccgag
cgccgggaactcctccaaaatgtcatgatccataatgaagccggtggtgatgattacgag
gatggggacgatttgttccatcgcgtcgatggcgagatgggacgtaagaagaagaagaag
aagggagcgagaagaaccgccgggaatttgagcgagttggcgggtggaagcgacatggca
tatgtggagatgaatcgcagtcggaacaaggacttgaagaagaagaaaggggagagtagt
gcctttttcaaaaagatccaacgggagcaggtcaagaggaaggcggcgatggattcctga
DBGET
integrated database retrieval system
