Drepanopeziza brunnea: MBM_06976
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Entry
MBM_06976 CDS
T03105
Name
(RefSeq) putative ATP-dependent RNA helicase rok1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
mbe
Drepanopeziza brunnea
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbe03009
]
MBM_06976
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MBM_06976
Ribosome biogenesis [BR:
mbe03009
]
Eukaryotic type
90S particles
Helicases
MBM_06976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18762911
NCBI-ProteinID:
XP_007294865
UniProt:
K1WBN9
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MDILKLLSRSTKKPNKAGQGTNAAAKLPSAGTNANPQLYHDAIPDPRGKKRKRGGEEIEE
TPDEEDDDVNFFAPKSAAPKPKKVAKTEDAKLEARLLDQDECRRILKSHRLKLTILPSGK
KDEKKVKKSKKAKVSKKVKEDYKQVYPQPLVAFADLKSTYGISGRMAENLVQQGYKIPTE
VQMASLPILLRPEVALGDSELEQMGAEVDLLAVAPTGSGKTLAFLIPIVDRIIQRRRGQK
EEDKATHGLDAIVVAPTKELASQIVNEAKKLSLGTGVKVVGMKKGMRIVEGGGAQEHGNE
SSSDEDDVEEMDGKKTSQPIVKGDMLITTPGLILRALSTSEPGRNHSLPSVRALVLDEAD
VLLDPLFRDQTLGIWSSCTNPSLRVTLWSATMGSNIEALASSTILSRRSSLSLPNTPIIR
LVVGLKDSAIPNITHRLVYAATEPGKLLALRQLLHPTAGSDPKAISLRPPFLVFTQTIPR
AVALHAELLYDIPSEAGGSSRIAVLHSDLSDSARSAVMSRFRTGEIWILITTDILSRGVD
FRGINGVVNYDVPNSGASYIHRVGRTGRGGRDGGVAVTFYTKEDIPFVKNVANIIAASEK
QAGKEPSEAGMQKWLLDVLPTPRKEEKKRLKAHGVEARRGGLGGKKDEKGNGKGKKGGKI
LISTKSGYERKLEHNRKGAIAGSRRRAKAEAGNPVEEASVDAADGEWGGIAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcaagctcctgtcgcgatcaacgaaaaaacccaacaaagccgggcaaggg
accaacgcagctgcaaagctcccgtccgcgggaaccaatgcgaacccgcaattataccac
gatgcgatccccgatcctcgagggaagaagaggaagcgcgggggcgaggagatagaagag
acgcccgatgaagaagacgacgatgtaaatttctttgccccgaagagcgctgctcccaaa
ccgaagaaagttgcgaagacggaagatgcgaagttggaagccagattgctggaccaggac
gagtgccgacgaattttgaaatcgcatcgactgaagctcacgatcttgccgtccggcaag
aaggacgagaagaaggtcaagaaatcgaagaaggcaaaagtcagcaagaaagtcaaggaa
gattacaagcaggtgtatccgcaaccgctggtagcgttcgcggatttgaagagcacttat
gggatctcggggcgcatggcggagaatttggtgcagcagggatacaaaattccgacggag
gtgcaaatggcgagcttgccaattttgttgcgcccggaggttgcgttgggggacagtgaa
ttggagcagatgggagctgaggtggatttactggctgtggcgcccacgggcagcggcaag
acactggcatttttgatcccgattgtggatcgcatcatacaacgtaggaggggtcaaaaa
gaggaggacaaggcgactcatgggctggatgctatagtggtggcgcccacgaaggagttg
gcaagccagattgtgaatgaggcgaagaagctgagtctggggactggcgttaaggttgtg
ggtatgaagaagggcatgaggatcgtagaaggcggtggtgctcaggaacatggtaatgaa
agctcgagcgacgaggacgacgtagaggagatggatgggaagaagacatcacaacccatc
gtaaaaggcgatatgctgatcacaactcccggtctcatcctccgcgccctctccacctcc
gaaccaggaagaaaccattccttaccgtcagtacgagccctcgtcctcgacgaagcagac
gtcctgcttgaccccctcttccgtgatcaaactctcggcatctggtcatcatgtacaaat
ccctcgctacgggtaacgctctggtcagcaaccatgggctccaacatcgaagccctggcc
tcctccactatcctctcccgccgctcctctctctctctcccaaacacgcctataattcgc
ctggtagtcggcctcaaagattctgccatccccaacatcacacaccgtctcgtctacgcc
gctaccgagcccggaaaactgctcgccctccgccagctgctccaccccacagcgggatct
gacccaaaagccatatccctcagaccgccattcctggtattcacgcaaaccatcccccga
gccgtggcattgcacgccgaacttctctacgacatcccctcggaagccggtggctcctcc
cgcatcgccgttctgcactcggacctctcggattccgcccgctcagctgtcatgtcgcgt
ttccgcactggcgagatctggatcctgatcaccaccgacatactctcccgcggcgtggac
ttccgcggcatcaacggcgtggtgaactacgacgtccccaactcaggggcgagctacatt
caccgcgttgggaggactggacggggtggcagggatggcggtgttgccgtgacgttctat
acgaaggaagatattccgtttgtgaagaatgtggcgaatatcatcgcagcgagcgagaag
caggctggcaaggagccgagcgaagcggggatgcaaaagtggctactggacgtgctgccg
acgccgagaaaggaggagaagaagaggttgaaggctcatggggtggaggcgagacgtggg
ggcttgggagggaagaaggacgagaagggaaacggcaagggcaagaaaggcggcaaaatt
ctgatcagtaccaagagtggttatgagcggaagttggagcataatcggaaaggtgccatt
gccggaagtcggcgcagggcgaaggctgaagctgggaatccggtcgaggaggcatcggta
gatgcggctgatggcgaatggggtggtatcgcggagtga
DBGET
integrated database retrieval system
