Drepanopeziza brunnea: MBM_07223
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Entry
MBM_07223 CDS
T03105
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_07223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_07223
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MBM_07223
mRNA degradation factors
3'-5' decay
Pan complex
MBM_07223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
18763158
NCBI-ProteinID:
XP_007295112
UniProt:
K1WQ21
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MSSIRFNPPGKSTGSPRPKGRGRGVENSKDTLCRNVTIYGHCRWEDSGCAFVHDPNKATN
PQAETLILDAHFVQDFGDVADKSGGSTLEFRPEWLATCFTTHGGPWLEQVLGSYGGISRA
VNKTRFFKAGSVARSFGQRHVTGGPGTKEPLKRPSESFMNCYDEGHSFPAYQAINCGSLF
CLQTWYRRITFMLRDAAVRIEIPCCWAPQFCRVGGISDAMLMVPSRNALTSQRMKKSLNF
DSPAFTPSTLPASGKVSTISSQAAAAAPFTPRGGGTTTPNQPESEPKMFNPAFIQEFTPQ
QNYDLAHSLLANGGTPDVQPQFDPFSMQAMAQAIPAAPYNPYLEENNAPTNTAGYFQTQS
AFASPAQPLQYHLYAPIGAHRQDLLAYQRHTHDFFMPNDLREDLQKKSEAARQVIPNTGL
PAVEHYHTLVPLDTSNSRSATVFGLPSWVYKAVSSKNGVTYILRRVEGFRLSNHLALTVA
KNWKRIDNASVVSVIDAFTTRAFGDSSLIFVYNYYPMSKTLIEAHFTNTNRYGNRIATTL
VAEQVLWGYVVQIANAIKSIHAANLAVRCMVPSKVLVTDKNRIRLSACSILDVIQYENGR
PIQDLQQEDFILFGRLILAIATNSSNLVSSNTPLKGAMESLKRNYSPEFRDTVEWLLTPA
VAPGTKDLNEFIRGISGQILASYDNALHSEDTTLSTLSQELENGRLFRLVAKLGTINERP
EYEGDVKWSEVGERYILKLFRDYVFHQVNQEGKPVVDLGHMLECLNKLDAGSAEKIKLVS
RDDQDCMIVGYKELKKQVDAAFGELLKPSGKRY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctatccggttcaatccgcccggcaaatctacaggatcgccgcgaccaaaagga
cgaggacgtggtgtagagaactcgaaggatacgctttgccgaaatgtcactatttacggg
cattgcaggtgggaagactctggatgtgccttcgttcatgaccccaataaagctacgaat
cctcaagccgagactctgatactggacgcgcatttcgtacaggactttggcgatgttgca
gacaaatctggaggttctactttagaatttcgtcctgaatggcttgcgacctgtttcaca
acacatggtgggccatggctcgaacaagtcctggggtcctacggaggcatcagtagggca
gtcaataagaccagatttttcaaggctgggtccgttgctcggtctttcggccagagacac
gttaccggaggcccaggtacaaaagaacctctgaaaagaccatctgagagtttcatgaat
tgctatgacgaaggtcattcattcccagcatatcaagctattaattgcggctccctgttt
tgcctgcaaacttggtatcggcggatcacttttatgctacgagatgccgctgttcgaatc
gaaataccttgctgctgggctcctcaattctgtcgcgttggtggtatctctgatgcgatg
ttaatggttccttctcgaaatgcgctcaccagtcaaaggatgaaaaagtcactgaatttc
gactccccggcgttcaccccctcgaccctaccggcctccggcaaggtctctaccatctca
tcacaagctgcagctgccgcgccgttcactccacgcggagggggcactaccacaccaaat
caacccgagagcgagccaaaaatgttcaatcccgccttcattcaagagttcactccccag
caaaactatgacttggcccacagccttcttgcaaacggaggtacaccagatgttcagcct
caattcgatcctttctctatgcaagctatggcccaggcaattcctgcggctccgtacaat
ccatatctcgaagaaaataatgctccaaccaatacagcgggctatttccagacgcagtct
gccttcgccagtcctgcccaacctctgcaatatcatctttacgctcccatcggcgcacac
agacaggacctactagcctatcagcgacacactcatgacttctttatgccgaacgacctc
cgagaagacttgcagaagaaatccgaggcggcgcggcaggtcattccaaatactggactt
ccagccgtcgaacattaccacaccctagtaccactagatacaagcaatagtagaagtgct
actgtctttggcctgccgagctgggtgtacaaagcggtatcgagcaagaatggcgttact
tatatcttgagacgggttgagggattccgactcagcaatcacctcgccttaacagttgcc
aagaattggaagaggattgacaacgccagcgtcgtatcggtcatagatgccttcacgacc
cgcgcctttggagacagttccctgatcttcgtctacaactactacccgatgtctaaaaca
ttaatcgaagcccatttcaccaatactaatcgatacggaaatcgtatcgccaccacctta
gtcgccgaacaagttctatggggctacgtcgtacagattgccaacgcaataaagtcaatc
cacgctgccaatcttgcagtgcggtgtatggtcccaagcaaggtcctcgtcaccgacaag
aatcggatccgcctgagcgcatgttctatcctggatgtcattcagtacgagaacggacga
ccaatccaagatcttcagcaagaggactttatattgtttggcaggctgatcttagcgatt
gccacaaatagctccaacctcgtctccagcaacacccccctgaaaggagctatggaaagc
ctgaaacgaaactacagccccgagtttcgcgatacagtcgaatggctcctcactcccgcc
gtagcgcctggtaccaaagacctaaacgagtttatccgcggcatctctggccaaattctg
gcatcctacgacaacgcgctccactcagaagataccactctcagcaccctgagtcaggaa
ctcgagaacggccgcttgtttcgccttgttgccaagctaggcacgatcaacgaacgcccc
gagtacgaaggtgacgtaaagtggagcgaggtcggggaacgatatatcctcaagctgttt
agagactacgttttccaccaggtcaatcaggagggcaagccggtggtcgacctggggcac
atgctcgagtgcttgaataaacttgatgcggggagtgcggagaagatcaagctcgttagt
agagatgatcaggattgtatgattgtggggtataaggaattgaagaagcaagtagacgct
gcatttggggagttgttgaaaccaagtgggaagcgatactag
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