KEGG   Drepanopeziza brunnea: MBM_07791
Entry
MBM_07791         CDS       T03105                                 
Name
(RefSeq) LSM domain-containing protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03018  RNA degradation
mbe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MBM_07791
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MBM_07791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbe03019]
    MBM_07791
   03041 Spliceosome [BR:mbe03041]
    MBM_07791
Messenger RNA biogenesis [BR:mbe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MBM_07791
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MBM_07791
Spliceosome [BR:mbe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MBM_07791
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 18763726
NCBI-ProteinID: XP_007295680
UniProt: K1XNQ7
LinkDB
Position
Unknown
AA seq 59 aa
MKGDKEFSGTLLGFDDYVNMVLEDVTEFDYSGNHTKLSKILLNGNNICMARLLTRPFER
NT seq 180 nt   +upstreamnt  +downstreamnt
atgaaaggcgacaaggaattcagcggcactcttctcggtttcgatgattacgtcaatatg
gttctcgaggatgtgactgaattcgactactctggcaaccacaccaagctctccaagatc
ctgttgaatgggaataacatctgcatggcacgtcttctcaccagaccgtttgagagatga

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