Drepanopeziza brunnea: MBM_07904
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Entry
MBM_07904 CDS
T03105
Name
(RefSeq) CCR4-NOT transcription complex
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_07904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_07904
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MBM_07904
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MBM_07904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF1192
T4SS
Cep57_MT_bd
ABC_tran_CTD
DUF7310
WKF
Nnf1
EAD9
Motif
Other DBs
NCBI-GeneID:
18763839
NCBI-ProteinID:
XP_007295793
UniProt:
K1WYL5
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAARKLQQEIDKCFKKVDEGVVEFDSIYEKIEQSSNAAQKDKLEDNLKREIKKLQRLRDQ
IKTWAQSNDIKDKGPLLDKRKLIETKMENFKAVEKAMKTKAFSKEGLSAAAKLDPKERAK
SDACDFLSTSVDDLERQIETLEAEAESLQATMKKGKNQSSKADRIDEIQRITERHKWHQG
KLELIKRSLENGGVETEQVNDLEESIKYYITDGMSEDYMEDETMYDDLDLKEDEDNYGMN
NDNDRVSSQDTQSIQDDTPEVDVRSSSILKPKAAPEPPVAAARRPSTQMKSPLPTVATLH
TPLTTISNSTTSLMKPAAVPTRAPGETLKYASAAAAAAASDKMGIAPLPPPPEALPPPNT
LTGHPPLPSHRTPSVMASPTPLFSQPASVHQTPVTRSSVLVGTQVPDTPGSSQTKSPALS
ASSVAPSTSRQTLEQPDSSRPWASRVTSGKAAAMQATHEKAKAEAETTPLKSNGVANGTK
SNVLDDQDESIFHLPSGLDDLLQSYESSSRRVTVPQSQSSQRMLSASLSSYPDLSDALAP
IAYRPKNPVKTPAYYPQEVNPCLDDARLYSRIDPDTLFYVFYYKQETYHQYLAAKALKDQ
SWRFHKQYQTWFQRHEEPKTITEEFEQGTYRFFDYESTWMNRRKADFRFAYKFLEDDV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgaaagcttcagcaggagatcgataagtgcttcaagaaggtcgacgagggg
gtagtggagtttgactcgatctacgagaagattgaacaatcgtcgaatgccgcccagaaa
gacaagctggaagataacctcaagcgcgagattaagaagctgcagaggcttcgggatcag
atcaagacatgggcccagtcaaacgacatcaaggacaaaggtcctctgctggacaagcgc
aaactgatcgaaactaagatggagaacttcaaggcggtcgagaaggctatgaaaacaaaa
gcgttttcgaaagagggcttatccgctgcagccaagctggatccaaaagagcgagcaaag
tcggatgcttgtgatttcttgagcacatcggtggacgacctagagcgccaaatagaaaca
ttggaagccgaggcggaatcgctacaggccactatgaagaaggggaaaaatcaatcatcc
aaggccgataggatcgacgagatacagaggataacagaacggcataaatggcatcagggc
aagctggagcttataaaacgatctttggagaatggcggagtggagaccgagcaagtcaat
gatctggaggaaagcataaagtactacatcacggatggtatgagtgaggactatatggaa
gacgaaacgatgtacgatgatctcgacctgaaggaagacgaagacaactacggcatgaat
aatgacaatgaccgtgtgtcatcgcaagacacacagtcaatacaggatgacacaccagaa
gtagacgtccggtcgagcagtatcctaaaaccaaaggctgcaccagagcctcctgttgct
gcagctcggagaccatcaacacagatgaagagtcctttaccgacggtagctactctacat
acgccgttaacgaccatctccaatagtacgacaagcctgatgaagcctgccgctgtgccg
acgagagcgcctggagagacattgaagtatgcttcagcggcagcggcagcagcagcaagt
gacaagatggggattgctccgttacctccgcctcctgaagctctcccaccgccgaatacc
ttaactggacatccgccgctaccctcgcatcgaaccccaagtgtgatggcatctccaacc
ccattgttttctcagccagcaagcgtgcatcagacacccgttacgcggtccagtgttctg
gtcggcactcaagtacctgatacgcctgggagttcgcaaacgaaatcaccagcattgagt
gcatcgagtgtagcccctagtacatcacggcaaaccttggagcaacccgatagttctaga
ccctgggcttcgagagtcacttccggcaaagctgcagcaatgcaggcgacgcatgagaaa
gccaaagccgaagcagaaaccactcctctcaagagcaatggggtcgcaaacggtactaag
agcaacgttctagatgaccaggatgaatccatcttccacttgccatcaggcctggacgac
ttgctacagtcatacgagagcagttcacgacgggttactgttccacagtcacagtcatcc
caaaggatgctctcagcgtcactgagcagctatccggacctctctgatgcattggcaccg
atagcttacaggccaaaaaaccccgtcaaaacgcctgcctactatcctcaagaggtcaat
ccctgcttagatgatgcccggttatattctaggatcgacccagatacgctgttctatgtc
ttctactacaagcaagagacgtatcatcagtaccttgcagctaaggctctcaaggaccag
agctggcgattccacaagcagtatcaaacttggttccagagacacgaggaaccaaagaca
atcactgaggagttcgagcaaggcacttatcgatttttcgactacgagagtacatggatg
aaccgcagaaaagcagactttagatttgcttacaagtttcttgaggacgatgtatga
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