Drepanopeziza brunnea: MBM_08070
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Entry
MBM_08070 CDS
T03105
Name
(RefSeq) replication factor-a protein 1
KO
K07466
replication factor A1
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03030
DNA replication
mbe03420
Nucleotide excision repair
mbe03430
Mismatch repair
mbe03440
Homologous recombination
mbe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MBM_08070
03420 Nucleotide excision repair
MBM_08070
03430 Mismatch repair
MBM_08070
03440 Homologous recombination
MBM_08070
03460 Fanconi anemia pathway
MBM_08070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbe03000
]
MBM_08070
03032 DNA replication proteins [BR:
mbe03032
]
MBM_08070
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_08070
Transcription factors [BR:
mbe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MBM_08070
DNA replication proteins [BR:
mbe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MBM_08070
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MBM_08070
MMR (mismatch excision repair)
MBM_08070
DSBR (double strand breaks repair)
HR (homologous recombination)
MBM_08070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
zf-like
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
18764005
NCBI-ProteinID:
XP_007295959
UniProt:
K1XN13
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAEEAQKHITRGALDAIFNDPIALQEQYPVPVCQCVQIKTLASSGEGAADRYRLVLSDVD
NFVQSMLATQANHVVHEGKLKKGSIVRLKQYQANAVKGKRILIILDLEVIESLGEMEKIG
DPVALTVKEEPDVKPANTTIAGNGFYGNQPKASAPIKQERALPSRTGPSSSASHATIYPI
EGLSPYAHKWTIKARVTQKSDIKTWHKPSSEGKLFSVNLLDETGEIKATGFNDQCDQLYE
LFQEGAVYYISSPCKVQLAKKQFSNLSNDYELTFERDTVVEKAEDQADVPQIRYNFTGIG
ELQNIEKDSMIDIIGVLKEVADVNQIVSKTTQKPFDKRELTLVDESDFSVRLTIWGKSAV
SFDAIPESIIAFKGAKVSDFGGRSLSLLSSGTMAINPDISEAHKLRGWYDSQGRMNTFQS
HQNMSGAGAAGGRSDPLKTIAQVREENLGMSEQPDYFSVKATIVYIKQDNFAYPACLNDG
CNKKVIDMGDGSWQCEKCNVSHPKPEYRYIMSLNVNDYTGQLWLNCFDDVGRLVMGHSGD
QLMELRENDTAAMEKAFETSNCTTYIFKCRAKMDNFQDQTRVRYQVMNASPVNFVQEAKK
LADLIKLYNID
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaagcgcaaaagcatatcactcgaggtgctctggatgctattttcaacgac
cccatcgccctccaggagcaatacccggttccggtatgccaatgtgtacagatcaagact
cttgcatcctccggcgaaggcgcggcggatcgttatcgtctcgtactgagcgatgtcgat
aattttgtgcagagcatgctcgccactcaggcaaaccatgttgtgcacgagggaaagctg
aagaagggttctatcgtcagactcaagcagtaccaggcaaatgccgtcaaaggcaagaga
attctgattatcttggacctcgaggttatcgaaagcttgggagagatggaaaagatcgga
gaccccgttgctcttactgtaaaagaagagccagatgtcaagcctgcgaatacgacaatt
gctggcaacggcttttacggaaaccagcccaaggcatccgctcccatcaagcaagaacga
gcacttccttcccggactggaccgtcgagttccgcgtcgcatgctaccatataccccatc
gaaggcttgtcgccatatgctcataagtggactatcaaagctcgtgtgactcagaaatct
gacatcaaaacatggcacaagccgagcagtgagggaaagctgttcagcgttaatcttctc
gatgaaactggcgagatcaaggcaacaggtttcaacgaccaatgtgaccagttatacgag
ctattccaagaaggcgcggtctattacatttcgagtccgtgcaaagtccaacttgcaaag
aagcagttctctaatctctcaaacgactacgagctcacattcgagagagacacggtcgta
gagaaggcggaagatcaagctgacgtccctcaaatccggtacaacttcaccggcatcgga
gagcttcagaatatcgagaaagactccatgatcgacattattggggttttgaaagaggta
gcggatgtcaaccagatcgtgtcgaagaccacacaaaagcctttcgacaagcgtgaactc
actcttgtcgatgagagtgatttttctgttagactgacaatttggggaaagtctgcggtc
tccttcgatgcgatacccgaatcgatcatcgctttcaagggcgccaaagtctcggatttt
ggtggtcgaagtttgagcttgctgtcttccgggaccatggctatcaaccccgatatctca
gaggctcacaagcttagggggtggtacgactcccagggacgaatgaacaccttccagtcg
caccagaacatgtctggcgcgggagctgccgggggtcgaagtgatcccttaaagacaatt
gcgcaagtccgagaggaaaacctgggcatgtctgagcaaccggattacttttccgtcaag
gccactatcgtctatatcaagcaagataactttgcctatcccgcatgcttaaacgatggt
tgcaacaagaaggttatcgacatgggcgacggcagttggcagtgcgagaagtgcaacgtc
agccacccaaagcccgagtatcgatacatcatgtcattgaacgtgaacgactacacgggc
cagctgtggctgaactgcttcgacgatgtcggacgtctggtcatgggtcatagtggtgac
caactcatggagctgagggagaatgacacggcggccatggagaaggcattcgagacttca
aattgcacgacttacatcttcaagtgcagagcgaagatggacaacttccaagaccaaaca
agagtccgctaccaagtcatgaatgcctcgcccgtcaactttgttcaggaggcgaagaag
ctcgcagatctcatcaagttgtacaacattgattag
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