Drepanopeziza brunnea: MBM_08532
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Entry
MBM_08532 CDS
T03105
Name
(RefSeq) GIY-YIG catalytic domain-containing protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
MBM_08532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_08532
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
MBM_08532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H
zf-HC5HC2H_2
PHD_Oberon
FANCL_C
Prok-RING_1
C1_1
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
18764467
NCBI-ProteinID:
XP_007296421
UniProt:
K1XLT3
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAIDRPIPAFYCCYLLRSTVRGSSVYVGSTPNPVRRLRQHNGVAKGGAVRTSRQSLRPWA
MTCIVTGFPSHIAALQFEWAWQNPHITLHIPPSARIQHAAGRKKSGQPKRPKHTVASLLS
NLHLLLRVPSFARWPLELRFLCPDVYKSWLRWCKAASEPVHKTLTIVTDFPPEAAEEVES
EEDEGGGKRRKKSKASYGIEALDVEYEDVKQQVEKGKSVIDFEREGSCALCKEELEHRGG
VYAICPSLDCEAVSHLTCLSRHFLGERDEEDEVLLPIKGTCPSCKEDLKWADVVKELTLR
MRGQKEVEKLLRVKRVRKTKATASQPFIESEDEDDDTDDEISEHEPDEELRGVSGMQAGA
SRPDTEVGDTWHEVDDSEESDTGSIASNISQGQSQSQSQKPTSYQANQAGTLGTVIEDSE
WDDADIIE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgaccgccccatacccgcattttactgctgctacctgctgcggtccaccgtt
cgcggcagcagtgtctatgtaggctcgacgccaaacccggtgaggcgacttcgccaacat
aatggcgttgcaaagggaggtgccgtgaggacgagccggcagagtttgaggccgtgggcg
atgacttgtatcgttaccggattccccagtcatattgctgcgctgcagtttgaatgggcc
tggcaaaaccctcacatcacgctacacatccccccctctgctcgcatccagcacgccgcc
ggcagaaagaagtccggccagcccaagcgccccaaacacaccgtcgcatccctcttgtct
aatctacatctcctcctgcgcgtcccctctttcgctcgctggcccctcgaactccgcttc
ctctgcccagacgtctacaaatcctggctgagatggtgcaaggcggcctccgaacccgtc
cataaaactttgaccatagtcacggatttcccgccagaagcagccgaggaggtggagagc
gaggaggacgagggtggtgggaagagaaggaagaaaagcaaggcaagctacgggatcgaa
gccttagatgtggagtacgaagatgtaaaacaacaggttgagaaggggaagtcggttatc
gattttgagcgtgaaggctcttgcgccttgtgtaaggaggagctcgagcacaggggaggc
gtatacgcgatctgcccgagtctcgactgcgaagctgtgtcacacttgacttgcttgagc
agacatttcctgggggagagagatgaagaggacgaggtgctattgccgatcaaagggaca
tgtccaagctgcaaggaggatttaaagtgggcggatgttgttaaagagttgacattgagg
atgaggggacagaaggaggttgaaaagttgttaagagtcaagagagtccgcaagacgaaa
gccacggcctcgcaaccttttatcgagtcagaggacgaagacgatgatactgacgacgag
attagcgagcatgaacccgatgaggaattaaggggggtaagtggaatgcaagctggcgct
agtcgaccggatacagaagtgggagatacttggcacgaagtcgacgactcggaggaatcc
gacactggctccatcgcgagcaatatctctcaaggccaaagccaaagccaaagccagaaa
cctacgtcttatcaggcgaatcaagctgggacgctgggcaccgtcattgaagatagcgaa
tgggacgatgcagacatcatcgagtga
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