Drepanopeziza brunnea: MBM_08910
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Entry
MBM_08910 CDS
T03105
Name
(RefSeq) RNA recognition domain-containing protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
mbe
Drepanopeziza brunnea
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbe03041
]
MBM_08910
03036 Chromosome and associated proteins [BR:
mbe03036
]
MBM_08910
Spliceosome [BR:
mbe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MBM_08910
Chromosome and associated proteins [BR:
mbe03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
MBM_08910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
RRM_5
HAT_PRP39_N
Nup35_RRM_2
Lsm_interact
CCDC47
Motif
Other DBs
NCBI-GeneID:
18764845
NCBI-ProteinID:
XP_007296799
UniProt:
K1WJB2
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MADPVGEDGWLALLDEASRTACDLTQRVAVVELYTQRALVAEPWSMKLWLAYCEWFWSLH
TDCQNGDAGWPKEEQEAGKEMFSMAAAIKVWKQGAAATEYRINDSHELWDRWVSIELAHL
ATDPRREHIERLKEMFFIRLQTPHATWEETSQTFSSFLTKYDLPAWETTMVAITNKSRAA
KDLYSNRADHELKLKRAVESGSAEAAKSQMLAYLAWESIQHYKKRKAWEPPSPMVLLVAL
YERALAGTTLGLDPSVWEEYVIFLTRNKDQAAENQLPPVLSVIPRATNHCPWSGALWARY
ILSAESESLPFSTMEAIKHRATNTRELDRDGMGSVIEFYTAWAGYLKRLTENAGATEEDR
DVADMGLPTALEDVREWGKRVAGRDNWQGDPLFRLEHIFIQHLTRKHAYDEARIQWKNLT
HTAAANGYEFWQQYYLWEMVVRGPTGPVTLATDVLAQGVAYRNLDWPEKLIEVYLRHCNN
YEQIDTLLKAMGFTNRLARNIANRRKKEAEDAAIAYAQLQPQTEAEPSAEGETSSGASKR
KRETAVENLDPGAQKKVKFADEDALREQHLKRDRENTTILIENLPPDVTSTKFRQYLKEY
GHLNNITLRTEADKQSTTAMAEFSTHEEAQSALLRDGKYFGDRQIRVTPGTGLTLYVTNY
PPTADENYLRKLFKECGEIFSIRWPSLKVNSHRRFCYISFRTVDAAAAATKLDGQSLGGM
YKLVAKHSDPPNRQKRQGALAEGREIHVTSIDPSITPDELEKLFSKYGKVERVNLLTKVS
GESKGAAFVSFATKEGAAAALDLDKTKLKSRVLNVEMAGATNFKPTATTFSKRSSASPGP
AGDYAMSPSPAAAESLNTHAQHTSGGGISNRTLCLMNIPDTVNDARVRALAESYGEILKL
SLRLDHQGAIIEYTDAASVGKAALALENHEIVPGRKLRTGGLKDLFAEKEETRSDRIQVG
QAKMPAAGFMQPAASVRRPVGPGGRGGLGQKRGLGFGGPKTSGENNTQVNGQQKAEGGAV
NKPKSNAEFKAMFMSGGTQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccggtgggagaagacggatggcttgcgctcctcgacgaggcaagtaggacc
gcctgcgaccttactcagagagtcgcggtcgtcgagctgtacacacaacgtgcgctcgtc
gcagagccctggtcgatgaagttgtggttggcctattgcgaatggttctggtccctgcat
accgactgccaaaacggcgacgccggatggcccaaggaggaacaggaagctgggaaagag
atgttctctatggccgcggcgatcaaggtatggaagcagggcgccgcggcgacagagtac
cgaatcaacgacagccatgagctttgggatcgatgggtctcaatcgagcttgcgcatctt
gccaccgacccgaggagggagcatatcgagcgtctcaaggaaatgttttttattcgattg
cagacaccccatgcaacgtgggaggagacctcgcaaactttctcgtcattcctcacgaag
tacgacctgccagcttgggaaactacgatggtcgcgattacaaacaaatcgagggctgcg
aaggatctgtacagcaatcgcgcagaccatgagttgaagttgaaacgtgccgtggaatcg
ggtagtgctgaggcggccaagtcacagatgctagcatatctagcttgggaatcaatccag
cactacaagaagagaaaagcatgggaacctccgagtccaatggttctcttggttgctttg
tatgaaagagcactcgctggaaccactcttggattagatcctagcgtgtgggaggagtac
gtgattttccttaccagaaacaaggaccaagccgccgaaaaccaactaccgccagtgctt
tctgtgattccccgagctacgaaccattgcccgtggtcaggggcgctgtgggcacgctat
attctctcagcagagtccgagtcgctccccttctctactatggaggcgatcaaacatcgc
gcgaccaatacccgtgaattggatcgcgacggaatgggcagtgtcatcgagttctacact
gcgtgggccgggtacttgaaaagattgaccgaaaatgctggagccactgaggaagacaga
gatgttgcagatatgggtcttccaactgcattagaagatgttcgagaatggggaaagcga
gtggctggaagggataattggcagggcgaccctctgtttcgcctggagcatatcttcatc
caacatttgacaaggaaacatgcatacgatgaagctcggattcaatggaaaaatctcacc
cacaccgctgcagctaatggatacgagttttggcaacagtactacttatgggaaatggtt
gtccgaggtccaactggtccggtcacactggctaccgatgttttagctcaaggcgttgca
tacaggaacttggactggccagaaaagctgattgaggtctacctccggcattgcaacaac
tatgagcaaatcgacacattactaaaggcaatgggatttacaaaccgactagctcgaaac
atcgccaacaggcgtaagaaagaggcagaggatgccgcgatcgcctatgctcaactgcaa
cctcagacagaggcagagccctcggctgagggtgagacgtcgtctggggcgtcgaagaga
aagcgcgaaacggcggtggaaaacctcgatcccggcgcccaaaagaaggtgaaattcgct
gatgaggacgcactacgggagcaacacctgaagcgtgaccgagagaacacaaccattctt
atagaaaacctgccacctgatgttactagcacaaaatttaggcagtatttgaaggagtac
ggacatttgaataacatcacgctgcgtactgaggcagacaagcaatctacgacggctatg
gcagaatttagtacccacgaggaagcacagtctgcgctcttgcgagacggcaagtacttc
ggcgataggcaaatccgagtcacccctgggactggcctgactctttatgtgacgaactat
ccgcccaccgctgatgaaaattaccttcggaaactcttcaaagaatgtggtgagattttc
agcattcgttggccgagtctcaaggtcaatagccaccggagattttgttacatatctttc
cgaaccgtagatgctgcggcagcggcgactaagctggatggccagtcgctcggtggtatg
tacaagctagtcgcaaaacactctgacccacctaacaggcagaagcgtcaaggtgcattg
gcagaaggaagagagattcatgtcacgagcatagatccgagcataacgccagacgaattg
gagaagctattttcgaaatatggaaaggttgagagagtgaatctcttgacgaaagtttcg
ggagagagcaaaggggccgcgttcgtgtcgtttgcaacgaaggaaggagctgctgcggct
ttggatttggacaagacaaaactcaagtctagagttctcaacgttgagatggcaggagcc
acgaattttaaaccgacggcaacgaccttcagcaaaagatcgtctgcatcgccaggtccc
gccggcgattatgccatgtcaccttctccggccgccgccgaatccctcaacacccacgct
cagcatacctcgggcggcggcatatcgaaccggaccctttgtctcatgaacatccccgat
acggtgaacgacgcgcgagtgcgtgctctcgcagagtcttatggcgaaattctaaaacta
tccttacgacttgatcaccaaggagcgattatcgagtacacggacgccgcatctgtaggt
aaagccgctctagctttagagaaccatgagattgttcccggtaggaagctcagaacggga
gggctgaaagatctatttgcggagaaggaagagacgaggagtgatcggatacaagttggc
caggctaagatgccagccgccggattcatgcaaccggcggcttctgttaggagacccgtc
ggccctggtggcagaggtggccttggacagaagagaggtctaggctttggtggtccgaag
acttcgggcgaaaacaatacacaagtcaatggccagcagaaagcggagggcggcgcggtt
aataagccgaagagcaatgctgaatttaaggctatgtttatgagtggaggtacgcaatag
DBGET
integrated database retrieval system
