Drepanopeziza brunnea: MBM_08973
Help
Entry
MBM_08973 CDS
T03105
Name
(RefSeq) vacuolar sorting protein 39 domain 1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe04138
Autophagy - yeast
mbe04142
Lysosome biogenesis
mbe04145
Phagocytosis
mbe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
MBM_08973
04142 Lysosome biogenesis
MBM_08973
04138 Autophagy - yeast
MBM_08973
04148 Efferocytosis
MBM_08973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mbe04131
]
MBM_08973
Membrane trafficking [BR:
mbe04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
MBM_08973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
VPS18_solenoid_2nd
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
18764908
NCBI-ProteinID:
XP_007296862
UniProt:
K1XJZ9
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MLSAFTARPIVELRQRDKFKIESILAYGDRLLVGLSTGSLKVYRVNEVPEENGKLNGSTR
PDAKAEDKPPSRPTSSSAAKPVDLLREVEKFSTRAIDQLAIIKEANVLISLSNSYIWIHD
LQAYTLQEQLTKTKSASTFAVTSNIVKDSATGIPEIISRLAVAVKRRLLLWSWHESELEH
STVEITLTDAIKSLTWASATKIICGMNSGYVIVDVISKEIEDIVGPGAIGGAAGAQAGRF
GGVGSASMGYMGLGSYIPKPLATKLADGEMLLAKDINSLFITSEGKPLEKRQVPWAQSPD
AIGYSYPYILALQSPSQGTLEVRNPDTLSLLQSIPLPNAKQLHFPHPTVSLAHAGKGFHV
ASERCIWRMGTTDYDSQIDELVEKERYDEAISILGMLEDALLKNKDERLREIKIQKAQSL
FDQRKYQDAVDIFMAKDVQAPPERVIKLFPRIIAGDLTILDDRPHDSEDSEEAGVSANGS
SAAGDLKPEMVGSPKPAAVSKLLKAKANHAKQASDTSSIRSFMRLDGGDASEITNPKPKP
AEDLPLEGKDLTTAVLALSGFLVQARNRMKAFLDAETGKLKPLEQNGQNGSSQHAFDSLL
TAPASDAEKDREQKLRETAKLIDTTLFRAYMLARPQLAGSLFRLPNFCDPDVVNEKLLES
GRFNDLVDFFHGKKLHRPALELLKKFGQGDGSGDASATLKGPQRTVGYLQNLPPEMIDLI
LEYADWPLRADTNLGMEVFLADTENAETLPRDRVVDFLQGIDVDLAVKYLEHVINELNDL
TPEFHNRLVQAYVQGLKEGRDKESDGWKGLMERLISFLRSSKQYSLSKAFGMIPRDDPNF
YEAQAVVLSNMGQHKQALEIYVFKIKAFGKAEEYCNHIHKTQQDSAIASPLQTRRGSFAS
SDRDDDDTPSIYHTLLSLYLTPPPPHNPNWPPALDLLSKHGSRLPASSTLNLIPPTLPIA
ELESYFRGRIRAANSIVNETRVVSGLRKTEVVSAQAELLLGDGALGNKGGRNRRVAVSEE
RVCGVCHKRIGRSVIAVLPDNEVVHYGCLNRVGNRPGAGGSGGMAGRRAGSWARS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgccttcactgctcgtccgattgtcgagctcaggcagcgggacaagttcaag
attgagtctattctggcctatggcgatcgtctgctggtagggctgagtacaggaagcttg
aaagtgtaccgggtcaatgaggtaccggaggagaacgggaaactgaacggctcgacgaga
ccagatgcgaaggccgaagataaacccccttcccgaccaacttcttcctctgccgcgaaa
ccagtcgacctactgcgggaggtggagaagttctcgacccgcgctattgaccagctggca
atcatcaaggaggccaatgtccttatatccttgtcaaattcctacatctggatccatgat
ttacaagcgtacaccctgcaagaacagttgacgaaaacaaaaagtgcttctacgtttgca
gtgacctcgaacattgtcaaggactcggcgactggcatccccgagatcatatccaggtta
gctgttgcggtcaagaggcggctgttactttggtcgtggcacgaatccgagctggaacac
agtacagtggagatcactttgacggatgctatcaagagcttgacctgggcctcggcgacg
aagataatatgcggcatgaactccggctatgtgattgtagatgtcatcagtaaggagatt
gaagatatcgttggtccgggggccattggtggagcggcaggtgcacaagccggtcgattt
ggaggcgttggatctgcaagtatgggatatatgggccttgggagctatataccgaaacca
ctggcgaccaaactcgcagatggggagatgttacttgcgaaggacatcaactcactcttc
atcacatcggaagggaagcctctagagaagagacaggttccgtgggctcaatcaccggat
gctatagggtattcatatccctatattctggccttgcaatcgccgtctcaagggacgtta
gaagttcgaaacccggatactttgtccctgctccaatctataccgctgccgaacgcaaag
caattacatttccctcatccgacggtgagtctcgcgcacgctgggaaggggttccacgtt
gccagtgagcgatgtatatggcggatgggtacaacagattacgattcccagattgacgag
ctagtcgagaaggagcggtatgatgaagcaatcagtatccttggcatgttggaagatgcg
ttgttgaagaacaaggacgaaagattgcgggagatcaagattcagaaagcgcaatcgcta
ttcgatcaacgcaagtatcaggatgcggtcgatattttcatggcgaaggatgttcaggct
cccccagagcgtgtcatcaagctattcccaaggatcattgccggtgacctgacgattctg
gatgacaggccccacgactcggaagacagtgaagaagcaggggtatccgccaacgggagt
tctgcggctggggatctcaaaccagaaatggtagggtctcctaaaccagccgctgttagc
aagctgctcaaagctaaggcaaatcatgccaagcaagcttcagacacatcgtcgattcga
tccttcatgagactggatggtggcgatgcgagtgagattaccaacccgaaaccgaagccg
gccgaggacctacctctagaagggaaggatctgacgactgccgttctcgcactctctgga
ttcctcgttcaggcacggaacaggatgaaggcgttcttagatgcagagactgggaagctg
aagccattggaacagaatgggcagaatggctcttctcaacatgctttcgactcactgctc
acggcaccagcatcggatgctgagaaagatcgggagcagaagctacgagaaaccgctaag
ctcatagataccacgctcttccgggcttacatgcttgcacgaccacaactggctggatcg
ctgttccgtcttcctaacttctgtgacccggacgtggttaacgagaagttgttggaaagc
ggacgattcaacgatctggtggatttttttcacggaaagaagttgcatcgtccggctctg
gagctgctcaagaagttcggacagggagatgggagtggggatgcgtcggctactctgaaa
gggccccagcgaaccgtcgggtatctccagaatctcccaccggagatgatcgacttgatt
ctcgaatacgcggattggcccctgagagccgacacgaatctgggaatggaagtcttcctc
gctgataccgagaacgcggagacgctaccaagagatagagtggtcgacttcctgcagggc
atcgacgtagacctcgctgtcaaatacttggagcatgtaataaacgagctcaatgacttg
actcctgaatttcacaatcggctcgtgcaggcatatgttcaaggactgaaggagggaagg
gataaagagtctgacggttggaagggattgatggagcggctgatctcgttcctgagatcc
agcaagcagtattctctatccaaagcttttggaatgataccacgggatgaccccaacttt
tatgaggcgcaggccgttgtcctcagcaatatgggacaacacaagcaagcattagagatc
tacgttttcaagataaaggctttcggaaaggcagaagagtactgcaaccatatccacaaa
acgcagcaagactccgcgatcgcctctccccttcaaacccgccgtggctcgttcgcctct
tccgaccgcgacgacgacgataccccttccatctaccacacactgctctctctctacctc
acaccaccgccacctcacaatcccaactggcccccagctctggatcttctatccaagcac
ggctcccgtcttccagcctcctcgacgctcaaccttatcccgcctactctcccgatcgcc
gaactcgagtcctatttccgaggccggatacgagcagcaaattccattgtgaacgagacg
cgcgtggtgtccggcctgcgaaagaccgaagtcgtctccgcccaagcagagcttctgtta
ggggatggcgcgcttggaaacaaaggcggcaggaatcggagagtggcagtcagcgaagag
agggtgtgcggggtgtgccataagaggattgggaggagcgttattgcggtgctgcctgat
aatgaggtggtgcactatgggtgcttgaaccgagtgggaaaccggcctggcgcgggcggt
agtggtgggatggccggacggagagcaggcagctgggcgcgatcgtga
DBGET
integrated database retrieval system
