Drepanopeziza brunnea: MBM_09164
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Entry
MBM_09164 CDS
T03105
Name
(RefSeq) mRNA cleavage and polyadenylation specificity factor complex subunit
KO
K06100
symplekin
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MBM_09164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_09164
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_09164
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MBM_09164
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MBM_09164
U7-dependent histone pre-mRNA processing factors
MBM_09164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
18765099
NCBI-ProteinID:
XP_007297053
UniProt:
K1W6J4
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MDSSVELQIKQLGDARKLVLSDASHYPQIIQGILPIAAPGARVELRRWVADFLAETFAAP
SLPSQQKETLSLLVLETLKNMIENPQEDPAVVRSVVQTAASVYPLVMRWIINNSYDSTTW
ERMTAIKSRILRMWDTAIPGVRICCIKFAQKVVLVQTKGPDADPRRGTPLEVSLSMVPSN
HPLIPPKNLEAEASGLLDRMLAVFHENSSDAILVDATLNSLSILIRSRPQTSNKILNIIL
SFNPLKQANSPMNPKLRVMVKSMEKTTRLLLLHVLKRDQQHPLAGKMHQYIERMMRARAD
IFDESSRKRGAPEPTDGSDAAKRQKLGAPAPVLAPKFHVPPLAPGPHTIAELFTVTTDEA
LKAFDVSQLPDDLVLRIGITILQRIDASTLNQAVEGVRQRYKILEATKPAVITAAAHLDV
EEEDDYEPDFDVAEDTEQILNKLDGAPPEEPKVAIPSFSGRFTLPAPPPLTTAQASEVGL
STVYKVFDVMRGLEERGKKSKAGINRLAASAYDRDAWITILTRIATRAPAGLEALDSLKA
ESDVPSYVSLADNIREFLCGYVLEDFRKRIDIALAWLCEEWYNDKMQMKEADQDATILHY
DKWVFKILDGMVPYLDGQDRGLVIKFLSDIPGLSMEVLDRVKKLCRDPATVNMALQSLLF
LVAYRPPVRELVLNAVEDVWDTYEDARPTVVKLFSKWRPGLTERSSSSKPATEGDKEMTK
PLLNNGGGSTVAVVAT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggactcctcggtcgagctccagatcaagcaactcggcgatgcgcgcaaactcgtcctg
agcgatgctagtcactacccgcagatcatccaaggcattctgcccatcgctgcacccggc
gcgcgcgtcgagctgcgaagatgggttgccgatttcctggccgagacgttcgcggccccc
tccctgccatcgcagcagaaggagaccctgagcttgctggtgctggagacattgaagaac
atgattgagaatccgcaggaggatcctgccgtggtgaggagcgtggtgcagacggcggca
agcgtgtacccgctggtgatgagatggattatcaacaactcgtatgatagcacaacatgg
gagcggatgactgcgattaaatcgagaattctgcggatgtgggacacggctattcctggt
gtgcgtatctgttgcatcaaattcgcccagaaagtagtcctggtacagaccaaaggccca
gatgctgacccgaggcgcggcacaccactcgaagtctctctgtctatggtaccgtcaaat
caccctcttatcccacccaagaatcttgaagcggaggcatcgggtctgttagataggatg
ctagcagtgttccatgaaaacagcagcgatgcgatcctcgtcgatgccaccctaaactcc
ctttccatcctgattcgttcccgtccccaaacttccaataagatcttgaacatcatcctg
agtttcaaccctttgaagcaagccaattcccccatgaaccccaaactccgtgttatggtc
aaatccatggaaaagaccactagattgttgcttctccatgtcctcaagcgtgatcaacaa
catccacttgctgggaagatgcaccagtatattgaacggatgatgagagccagggcagat
atctttgatgagtcgtcacggaagcgaggtgcccccgagcctacagatggctcagatgct
gcgaagcgacaaaagctgggagctcctgccccggtcctggccccgaaatttcatgttcct
cctctggcacctgggccccatactattgcggaactcttcactgttactacggatgaggct
ttgaaggctttcgatgtctcacagctgccagatgatctggtccttaggattggcattacg
atattgcagaggattgatgccagtacgctgaatcaagcagtcgagggtgtccgtcaaagg
tacaagattttggaagccaccaagcctgccgtaatcactgccgcagctcatctggatgtg
gaagaggaagatgactacgagccagactttgatgtagcagaagacacagagcaaatttta
aacaaactcgacggtgcacctccggaagagccgaaggtcgcaataccctctttctctggc
cgctttaccctccctgcaccaccacccttaacaacagcacaggccagcgaagtcggtctg
tcgacagtctacaaggtattcgacgtgatgagaggactggaagagagaggcaagaaaagc
aaggccggcatcaacaggcttgcagctagcgcatatgatcgagacgcatggatcaccatc
ctgacccgtatcgctacacgtgctccagccgggctcgaagcgctcgattccttgaaagcc
gaatcggacgtcccatcctacgtctccctcgccgataatatccgtgagttcttgtgcggc
tacgtcctcgaggacttccggaaacgcatcgacatcgccttggcctggctgtgcgaggag
tggtacaacgacaagatgcagatgaaagaagccgaccaagacgccaccatcctgcactac
gacaagtgggttttcaagatcttggatggcatggtgccgtatctagacggccaggataga
ggtttggtcattaagttcctcagtgatatcccaggcttgagcatggaggttttggaccgg
gtgaagaagctgtgccgggatcccgcgacggtcaacatggcgctgcagagccttctgttc
ctggttgcgtaccggccgcccgtcagagagctggtattgaatgctgtggaggatgtttgg
gatacctacgaggacgcgagaccaacggttgtcaagctcttttccaaatggcggccggga
ctaaccgagcgctcctccagctccaagcccgccaccgagggggacaaagagatgacgaag
cctttattgaacaatggtggcggcagcacagttgctgtagttgctacatag
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