Drepanopeziza brunnea: MBM_09579
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Entry
MBM_09579 CDS
T03105
Name
(RefSeq) tfiih complex helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03022
Basal transcription factors
mbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MBM_09579
09124 Replication and repair
03420 Nucleotide excision repair
MBM_09579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_09579
03036 Chromosome and associated proteins [BR:
mbe03036
]
MBM_09579
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_09579
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MBM_09579
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MBM_09579
Chromosome and associated proteins [BR:
mbe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MBM_09579
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MBM_09579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
UvrD_C
Tricorn_C1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
18765514
NCBI-ProteinID:
XP_007297468
UniProt:
K1WUH5
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYYPEHRKLIYCSRTMSEIEKALF
ELEALMKYRAEMLGHEEEFRGLGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEK
KERGEDVPVCIYHDNLDLLEPHDLIPNGVWTFEGILKYGEEHKQCPYFTSRRMMSFCNVI
IYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQN
LEIKITDMKNSDADKLKSEYAKLVEGLRDADDARQEDAFMSNPALPDDLLKEAVPGNIRR
AEHFITSESDLLQTRMKVRQVISETPPSFLAHLKEYTFIEKKPLRFCAERLTSLVRTLEL
TNIEDYQPLQEVATFATLVATYEKGFVLILEPYESDTAEVPNPVLHFACLDAAIAIKPVF
DRFSSVIITSGTISPLEMYPKMLGFTAVVQESYTMTLARRSFLPMIVTRGSDQVAISSGF
QVRNEPSVVRNYGHLLTEFSKLTPDGMVVFFPSYLYMESIISMWQGMGILDEVWKNKLIL
VETPDAQETSLALDTYRTACNNGRGAILLCVARGKVSEGIDFDNQYGRTVLCIGVPFQYT
ESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFLKKR
NQLPKWIDDAMHEAEVNLSTDTAVGTAKKFLRGMAQPFQASDQEGISTWSLEDLEAHREK
VDEENIRLLREEERRAVEGGRGGVDDGEDDDDEMGGLGNGNRRGGEPDQYGFDEDDEDAL
MAMGAN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatctcaagagaacgctcgatgcaggcggccactgtgttctggaaatgccctcg
gggactggcaagacagtctccctgctctcccttattgtcgcataccagcagtactaccct
gagcaccgcaagctgatatactgctcacgtaccatgtcggagatcgagaaggccctcttt
gagctggaagccctgatgaaatacagagcggagatgctgggccacgaagaggagttccga
gggctgggactgacgagtcgcaagaacctgtgtctgcatccgagcgtcaagagggagaag
agcgggacggtggtcgacgcccgatgtcggagcttgacggctggctttgtcaaagagaag
aaggagaggggcgaggacgtgccggtttgtatttaccacgataatttggacctgctggag
ccacatgatttgattccgaatggtgtctggacttttgaggggatcttgaagtatggagag
gagcataagcaatgcccgtatttcacttcgagacgaatgatgtcattttgcaatgtcatt
atctactcctaccactaccttctcgatccgaagatcgcagaacgggtctccaaggagctc
tccaaggattgtattgtggtgtttgacgaagcgcataacatcgacaacgtctgcatcgag
tcgctcagcacagatatcaccgaagactcgctgcggaaagctacgagaggggctcagaat
ctggagatcaagatcacggatatgaagaatagtgatgcggataagctgaaaagcgaatat
gctaagctggtggagggcttgagggatgctgatgacgctcgtcaggaggatgcgttcatg
tcgaatcctgctctccctgatgatctgctgaaggaagctgttcctggaaatattagaaga
gctgagcatttcattacatctgagtctgacctgctccagactcgaatgaaggtccgacag
gtgatctctgagacacccccgtcttttctagcacatctcaaggagtacactttcattgag
aagaaacctttacgattttgcgccgagagactgacttcgcttgtgcggacgctcgagttg
acgaatatcgaagactaccaaccactacaagaagtagcaacatttgcaacgctcgtggca
acctacgaaaagggattcgtccttatcctggaaccctatgagtcggacacggcagaagtc
cccaatccggtcctccactttgcctgtctagatgcagcaatcgcgatcaaacccgtcttc
gaccgcttctcctctgtcatcatcacctccggaaccatctcccccctcgaaatgtacccc
aaaatgctcggattcacagccgtggtccaggaatcctacaccatgacgctcgcacgccgc
tctttccttcccatgatcgtcacccgtggctccgaccaagtcgccatctcctcgggcttc
caagtccgtaacgagccctctgtcgtccgcaactacggacacctgctcaccgaattctct
aaactcaccccggacggcatggtcgtctttttcccttcctacctgtacatggaatccatc
atcagcatgtggcaaggcatgggcatcctcgacgaagtctggaagaacaagctcatcctc
gtcgagacgcccgacgcgcaggaaacgtccctggcgctcgacacgtaccgcacggcgtgc
aacaacgggcgtggcgccatcctgctctgcgtcgcccggggcaaggtcagcgagggcatc
gacttcgacaaccagtacggccgcacggtgctctgcatcggcgtccccttccagtacacg
gagtcgcgcatcctcaaggcacgcctcgagttcctgcgcgagacgtaccgcatccgcgag
aacgacttcctctccttcgacgccatgcgccacgccgcgcagtgcctgggccgcgtcctg
cgcggcaaggacgactacggcatcatggtgctcgccgaccgccgcttcctcaagaagcgg
aaccagctgcccaagtggatcgacgacgccatgcacgaggccgaggtcaacctcagcacc
gacacggccgtcgggactgccaagaagttcctgcgcggcatggcgcagccgttccaggcg
agcgaccaggagggcatcagtacgtggagcctcgaggatctggaggcccatcgggagaag
gtggacgaggagaatattcgcctgctgcgggaagaggagcggagggctgtggagggtggg
aggggtggggtggatgatggggaggatgatgatgatgagatgggcgggctggggaatggg
aatcggagggggggtgagcctgatcagtatgggttcgacgaggacgatgaagatgctttg
atggcgatgggtgcgaattga
DBGET
integrated database retrieval system
