KEGG   Drepanopeziza brunnea: MBM_09781
Entry
MBM_09781         CDS       T03105                                 
Name
(RefSeq) WD domain-containing protein
  KO
K12880  THO complex subunit 3
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03013  Nucleocytoplasmic transport
mbe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MBM_09781
  09122 Translation
   03013 Nucleocytoplasmic transport
    MBM_09781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbe03019]
    MBM_09781
   03041 Spliceosome [BR:mbe03041]
    MBM_09781
Messenger RNA biogenesis [BR:mbe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MBM_09781
Spliceosome [BR:mbe03041]
 Complex C
  Other components
   EJC/TREX
    MBM_09781
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MBM_09781
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Gbeta WDR55 Beta-prop_WDR3_2nd ANAPC4_WD40 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Tricorn_2nd eIF2A Beta-prop_HPS5 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Cytochrom_D1 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 18765716
NCBI-ProteinID: XP_007297670
UniProt: K1WIN7
LinkDB
Position
Unknown
AA seq 332 aa
MVPPRQRANISKDKFSAYFSNLRTTPYHDPSSRGSGSHGIRSIAWNPLGTLVATCADKTL
RVWNPEKSNVRYSTELKGHEKAIEKIAFNPVKEAELCSVSGDGVVKFWDVRTKAIINEVK
DLGDAFTLAWAPDGESLIVGNKADKLFVLSPTSPTPTASYQQDVQTNQIVFCFSGKKIFL
TTGEGSVKILSYPDFEPVFYSSYDPATPFTLLGHTSSCIAIELQPTARFLATGGTDSIIA
LWDTTDWICQRTLVDMTGPVRNISFSFDGSYIIGGSEEGGALEIAHTETGDHVHTIKTGG
SCSVVAWHPSRYWLAYAEGGSLRIVGVDPEKR
NT seq 999 nt   +upstreamnt  +downstreamnt
atggttcctcctcgtcagcgggcgaatatttcgaaagataaattctccgcctacttcagc
aatctccggacaactccatatcatgacccatcttctagaggatctggttctcacggcatt
cggtctattgcttggaatccattgggtaccttggtagccacctgtgctgataaaacactt
cgggtgtggaatccagaaaagtcaaatgttcgctactcaacagaactcaagggccatgag
aaggctattgaaaaaatcgcgttcaacccagtgaaggaggccgagctgtgcagtgttagt
ggcgacggtgttgtgaagttctgggatgttagaactaaagccatcataaatgaggtcaag
gatctcggtgatgcatttacgcttgcttgggctccagatggagagtctttgatagtagga
aacaaggcggacaagctttttgtactatcgccaacttcgcctactccaaccgcttcgtat
caacaggatgttcaaaccaaccagatcgtgttctgtttcagcggcaaaaagatatttttg
acaactggcgaaggatcagtcaaaatcctctcatacccagactttgagccggtgttctac
tcaagttacgatccggccactccttttaccctcctcggccatacttcgtcatgtatcgcc
atcgagttacaacccacggctcgtttcctcgctaccggaggaacagattccatcattgca
ctatgggacaccacggactggatctgccagagaacactggtcgacatgactggtcccgtc
agaaacatcagtttcagtttcgatggaagttacatcattggtggtagcgaagagggagga
gctttggaaattgcccatactgagacaggtgaccatgtacacaccatcaagactggaggc
tcttgttccgtggtagcttggcatccaagtaggtattggctggcatatgctgaaggcgga
agcttgagaatcgttggagtagacccggagaagagatag

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