Microbacterium betulae: N8K70_13610
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Entry
N8K70_13610 CDS
T10464
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mbet Microbacterium betulae
Pathway
mbet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N8K70_13610 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbet03021
]
N8K70_13610 (rpoC)
03400 DNA repair and recombination proteins [BR:
mbet03400
]
N8K70_13610 (rpoC)
Enzymes [BR:
mbet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N8K70_13610 (rpoC)
Transcription machinery [BR:
mbet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N8K70_13610 (rpoC)
DNA repair and recombination proteins [BR:
mbet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N8K70_13610 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WOF22416
UniProt:
A0AA97FF78
LinkDB
All DBs
Position
complement(2877385..2881260)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDATTFDELRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEEARHRDLPTHENNLRLEIKNLGDRRDARIADRLQKLEEE
LAALEAEDAKADQKKKVRDAAEKEMTLIRKRADEQVAKLERMWEEFRSLKVGELKAEDDV
FQELQDRFGQYFEAHMGAESIQRRLAAFDLPAEAESLRTQIAEGKGQRKIRAIKRLKVVN
SFMTTGMSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHITTLKDGAAGEGR
VFGSVWEAQLAKEEGTLDLQSKVRIRVPGLTFLEGQAPEGYEKHGLVDTSLGQAIFNDQL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVVVAETLDKIKDTGFYWATRSGVTVALSDVL
TPANKGEIVAKYEQQAAKVTAQYEKGLTTDEERRTELVRIWTEATDEIQKEMRANFPEDN
TINRMVSSGARGNWLQIRNIAGIRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTSKGLEYPIAAADSSGVLVRDANVE
NSVFARSLAVDVVAEDGTVLAEAGQDVGDVLIDALVEAGVTSIKVRSVLTCDSAVGVCAR
CYGRSLATGNLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIEETEKQKKVILTPDNGDEPHVYPVLKRATLLVEDGQHVSV
GDSIQVGTRDPKEIMRVQGAREVQKYLVSGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGETDLLPGEMVDMRRYQDINRAVIAEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTEAALQGKRDPLIGLKENVIIGKLIPAGTGLAKYRDVVVEATEEAKSERYPNRI
FASDGAYAEGDYSFVDFDAFTTDDFTPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgcaacaactttcgatgagcttcgcatcggcctggccaccgccgacgacatc
cgtcgctggtccttcggcgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttcggagagcagatcttcggccccagccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtccgcttcaagggcatcgtgtgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgccgcgagcgcatgggccacatcgagctcgccgcgccc
gtgacgcacatctggtacttcaagggcgtcccctcgcgcctggggtacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatggtcatctcggtcgac
gaggaggcgcgccaccgcgaccttccgacgcacgagaacaacctgcgcctcgagatcaag
aacctcggcgaccgccgggacgcgcgcatcgccgaccgcctccagaagctggaggaggag
ctcgccgcgctcgaggccgaggacgccaaggccgatcagaagaagaaggtccgcgacgcc
gccgagaaggagatgacgctcatccgcaagcgcgcggacgagcaggtcgccaagctcgag
cggatgtgggaggagttccgctccctcaaggtcggcgagctcaaggcggaggacgacgtc
ttccaggagctgcaggaccgcttcggccagtacttcgaggcgcacatgggcgccgagtcg
atccagcgccgcctggccgcgttcgacctgcccgccgaggcggagtcgctgcgcacgcag
atcgccgagggcaaggggcagcgcaagatccgcgcgatcaagcgcctgaaggtcgtcaac
tccttcatgacgacgggcatgagcccggcggccatggtgctcgacgtcgtcccggtcatc
ccgccggagctgcgcccgatggtgcagctggacggaggccgcttcgccacgagcgacctg
aacgacctctaccgccgcgtgatcaaccgcaacaaccgtctgcgccgtctgctcgacctc
ggggcacccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtcccgtcacgggcacgggcaaccgcgccctgaag
tcgctcagcgacatgctcaagggcaagcaggggcggttccggcagaacctgctcggcaag
cgcgtcgactactcgggccgatcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtcatcaagcgcctg
atcgacctcggtcactcgcagaacatcaaggcggccaagcgcgcggtcgagcgcacgcgt
cccgaggtgtgggacgtgctcgaggagatcatccgcgagcgcccggttctcctgaaccgc
gcgcccacgctgcaccgtctgggcatccaggcgttcgagccccagctcgtcgagggcaag
gccatccagctccacccgctcgtctgcgcggcgttcaacgccgacttcgacggcgaccag
atggccgtccacctgccgctgtcggtcgaggctcaggccgaggcccgcgtcctcatgctc
gcgtcgaacaacatcctgaagccgtcggacggccgtccggtgaccctgccctcgcaggac
atgatcatcggcctgcaccacatcacgacgctcaaggacggcgcggccggcgaaggccga
gtgttcggctcggtgtgggaggcgcagctcgccaaggaggagggcaccctcgacctgcag
tccaaggtgcgcatccgcgtccccggcctgacgttcctggagggccaggctcccgagggc
tacgagaagcacggtctcgtcgacacctcgctcggccaggcgatcttcaacgaccagctg
ccgaagggctaccccttcgtgcgcgagcaggccgacaagggcaagctctcgcagatcgtc
aacaagctggcggaggagtaccccaaggtcgtcgtggcggagacgctcgacaagatcaag
gacacgggcttctactgggccacgcgttccggcgtcacggtcgcgctgagcgacgtcctc
accccggccaacaagggcgagatcgtcgcgaagtacgagcagcaggccgcgaaggtcacc
gcccagtacgagaagggcctcaccaccgacgaggagcgccgcaccgagctggtccgcatc
tggaccgaggccacggacgagatccagaaggagatgcgcgccaacttccccgaggacaac
accatcaaccgcatggtgtcgtcgggtgctcgtggaaactggctgcagatccggaacatc
gcgggcatccgcggtctggtgaacaaccccaagggcgagatcatccctcgtccgatcatc
tcctcgtaccgcgagggactgtcggtcgcggagtacttcatcgccacccacggcgcccgc
aagggtctggccgacacggctctgcgcaccgccgactccggttacctcacgcgtcgtctc
gtcgacgtctcgcaggacgtcatcatccgcgaggaggactgcggcacgtcgaagggcctc
gagtacccgatcgccgcggcggactcctcgggcgtgctggtgcgcgacgcgaacgtcgag
aactcggtgttcgcccgcagcctggccgtcgacgtggtggccgaggacggaacggttctc
gccgaggccggtcaggacgtcggcgacgtcctcatcgacgccctcgtcgaggcgggcgtc
acctccatcaaggtgcgctcggtcctcacgtgcgactccgcggtgggcgtctgcgcccgc
tgctacggtcgctccctcgcgacggggaacctcgtcgacatcggcgaggccgtcggcatc
atcgcggcccagtcgatcggcgagcccggcacgcagctgacgatgcgcacgttccacacc
ggcggctcggcctcggcggacgacatcacgcagggtcttccccgcgtgcaggagctgttc
gaggcccgtaccccgaagggcgcctctcccatcgcggaggccgacggacgcatcacgatc
gaggagaccgagaagcagaagaaggtcatcctcacgcccgacaacggcgacgagccgcac
gtctacccggtgctgaagcgcgcgacgcttctcgtcgaggacgggcagcacgtgtccgtg
ggcgactccatccaggtcggaacgcgcgacccgaaggagatcatgcgcgtgcagggcgct
cgcgaggtgcagaagtacctcgtcagcggcgtgcagggcgtgtaccgctcccagggcgtg
ccgatccacgacaagcacatcgaggtcatcgtccgtcagatgctgcggaaggtcaccgtc
gtcgatcacggcgagaccgacctgctgccgggtgagatggtcgacatgcgccggtaccag
gacatcaaccgcgcggtgatcgccgagggcaagcgccctgcgtcgggccgtccggagctg
atggggatcacgaaggcgtcgctcgcgacggagtcgtggctgtcggcggcgtcgttccag
gagacgacgcgcgtgctcacggaggccgcgctgcagggcaagcgcgatccgctgatcggt
ctcaaggagaacgtcatcatcggaaagctcatccctgcgggcaccggcctcgcgaagtac
cgcgacgtcgtcgtcgaggcgacggaggaggccaagagcgagcgctaccccaaccgcatc
ttcgcgtcggacggcgcgtacgcggagggcgactactcgttcgtggacttcgacgccttc
acgaccgacgacttcacgccgggaacatataactga
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