Microbacterium betulae: N8K70_15100
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Entry
N8K70_15100 CDS
T10464
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mbet Microbacterium betulae
Pathway
mbet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8K70_15100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbet03019
]
N8K70_15100
03009 Ribosome biogenesis [BR:
mbet03009
]
N8K70_15100
Enzymes [BR:
mbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N8K70_15100
Messenger RNA biogenesis [BR:
mbet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8K70_15100
Ribosome biogenesis [BR:
mbet03009
]
Prokaryotic type
rRNA helicases
N8K70_15100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
HEM4
adh_short
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOF22702
UniProt:
A0AA97FJJ0
LinkDB
All DBs
Position
complement(3190403..3192175)
Genome browser
AA seq
590 aa
AA seq
DB search
MASSESPAAPTEDVSAETVPTFSDLGLGDAVLKALKDVGYETPSAIQAQTIPPLLGGRDV
LGVAQTGTGKTAAFALPILDQLDPGQKTPQALVLAPTRELALQVCEAFEKYASHLRGVHV
LPVYGGQGYGTQLSALRRGVHIVVGTPGRILDHLDKGTLDLSALRFLVLDEADEMLKMGF
AEDVDTILAETPAEKQIALFSATMPAQIRRISQQHLRDPEEITVKGKTTTSANITQRYLM
VSYPQKVDALTRILEVENFEGMIVFVRTKSETETLAEKLRARGYTAAAISGDVAQAQRER
TVDQLKSGKLDILVATDVAARGLDVDRITHVVNYDIPIDTESYVHRVGRTGRAGRSGAAI
SFVTPRERRLLGAIEKATRQPLTEMRIPSVEDVNVTRLSRFDDAITVALADQEKLGQYRD
IIAHYVEHHDVVEADVAAALAIVSQGDTPLLLEEEIRPPRRERPEREQGARDERRPRSGA
PLSPYRIEVGKRQRVEPRQIVGALANEGGLSRQDFGRIDIRPDFSIVELPADLPRETLDR
LRDTRIGGKPIELRPDPRPFRSTRGPRDDRDGRGGPRGDRGDRPARKPRS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttccgaatcccccgccgcgccgaccgaggacgtctccgcggagaccgtcccg
accttctccgacctgggcctcggcgatgccgtcctcaaggcgctgaaggacgtcggctac
gagaccccctccgcgatccaggcccagaccatccccccgctgctcggggggcgcgacgtc
ctcggcgtcgcgcagacgggcacgggcaagacggccgcgttcgcgctgcccatcctcgac
cagctcgacccggggcagaagacgccgcaggcgctcgtcctcgcgcccacgcgcgagctg
gccctgcaggtgtgcgaggcgttcgagaagtacgcctcgcacctgcgcggcgtccacgtg
ctgcccgtctacggcggccaggggtacggcacgcagctgtcggcgctccgtcgcggcgtc
cacatcgtcgtcggcacgcccggccgcatcctcgaccacctcgacaagggcacgctcgac
ctctccgcgctgcgcttcctcgtgctcgacgaggccgacgagatgctcaagatgggcttc
gcggaggacgtcgacacgatcctcgccgagacgcccgcggagaagcagatcgcgctgttc
tccgcgacgatgcccgcccagatccgccgcatctcgcagcagcacctccgcgacccggag
gagatcaccgtcaagggcaagacgacgacgtcggcgaacatcacccagcgctacctcatg
gtgtcgtatccgcagaaggtcgacgcgctcacgcgcatcctcgaggtcgagaacttcgag
gggatgatcgtcttcgtccgcacgaagagcgagaccgagacgctcgcggagaagctgcgc
gcccgcggctacacggccgccgcgatcagcggcgacgtggcgcaggcgcagcgcgagcgc
acggtcgaccagctgaagtcgggcaagctcgacatcctcgtcgcgacggacgtcgccgcg
cgcggcctcgacgtcgaccgcatcacgcacgtcgtcaactacgacatcccgatcgacacg
gagtcgtacgtccaccgcgtcggccgcaccggtcgtgcgggccgtagcggcgcggccatc
agcttcgtcacgccgcgcgagcgccgtctcctcggcgcgatcgagaaggccacgcgccag
cccctcaccgagatgcgcatccccagcgtggaggacgtcaacgtcacgcggctcagccgc
ttcgacgacgcgatcacggtcgcgctggccgaccaggagaagctcggccagtaccgcgac
atcatcgcccactacgtcgagcaccacgacgtcgtcgaggcggacgtcgccgccgccctc
gcgatcgtgtcgcagggtgacaccccgctgctgctcgaggaggagatccgccctccccgc
cgcgagcggcccgagcgcgagcagggcgcccgcgacgagcgccgcccccgcagcggcgcc
ccgctctcgccgtaccggattgaggtcggcaagcgccagcgcgtcgagccgcggcagatc
gtcggtgccctcgccaacgagggaggcctcagccggcaggacttcgggcgcatcgacatc
cggcccgacttctccatcgtcgagctccccgccgacctcccgcgtgagacgctcgaccgg
ctgagggacacccgcatcggcggcaagcccatcgagctgcgccccgacccccgtccgttc
cgcagcacccgcggcccgcgcgacgaccgggacggacgcggcggcccgcgtggggaccgc
ggcgaccgcccggcgcggaagccgcgctcgtag
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