Moschus berezovskii (Chinese forest musk deer): 129535603
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Entry
129535603 CDS
T09065
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129535603 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbez03041
]
129535603 (PRPF40B)
Spliceosome [BR:
mbez03041
]
Complex A
U1 snRNP components
U1 related factors
129535603 (PRPF40B)
Complex B
129535603 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
129535603
NCBI-ProteinID:
XP_055250050
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MKTRSNIVFIRRVSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQ
RPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASS
AVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDT
GKPYYYNNQSKESRWTRPQDLDDLEALVKQEAVGKQQQPQTLQPQPPQPQPDPPPVPPGP
TLLPTGLLEPEPGGSEDCTVSEAAQPLEQGFLQQPEEGPSSSAGQHQPPQQEEEESKLEP
ERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNA
YKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERD
RKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSF
AQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHE
TGQLHSMSTWMELYPAVSTDIRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDIL
KDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRL
RRREAAFRSMLRQAVPAVELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETE
CQHLHSKGRKHGRKGKKHHRKRSHSPSVSWRGSESGDEELPPPSLRPLKRRRRNPSESGS
EPSSSLDSVESGGAALGGRSSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDP
EERAAKESDEKEPEQDMDRDLRRAELPNRSPAFGVKKEKTGWDTSESELSEGELERRRRT
LLQQLDDHQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccagaagtaacattgtgttcatcaggagagtgtcggttcccgattctggtccc
cggcccccagcagcgcctgcccccttcccaccggggccccccatgatgccaccacccttc
atgcctcctccaggaatccccccaccttttcctccaatggggctccctcccatgagtcag
agaccaccagccatcccccccatgccacctggcatcatgcccccaatgctcccaccaatg
ggggcaccaccgccactcacacagataccaggaatggtacctcccatgatgccaggaatg
ctgatgccagcagtgcccgtcaccgcagcgacggctccgggtgcggacaccgccagctct
gctgtggctgggacaggccctccgagggccctgtggagtgagcatgtggcccctgatggg
cgcatctactactacaatgctgacgacaagcagtccgtgtgggagaagcccagcgtgctc
aagtcaaaagcagagctcctgctgtcccagtgtccctggaaagagtacaagtcggacaca
ggcaaaccttactactacaacaaccagagtaaggagtcccgctggacccggccccaggac
ctggatgacctggaggctctagtcaaacaagaggctgtagggaaacagcagcagccacag
acactacagccacagcctcctcagcctcagcccgatcccccacctgtgccacctggcccc
accttgctgcccacaggcctcctagaacctgagccaggtgggagtgaagattgcactgtg
tcggaggctgcccagcccctggagcaggggttcctgcagcagccagaggagggccccagc
agttctgctggacagcatcagccaccacagcaagaggaagaagaatcaaaactggagccg
gagaggtctggcctcagttggagcaaccgggaaaaggcaaaacaggccttcaaggagctg
ctgagggacaaggctgtcccctccaatgcttcgtgggaacaggccatgaagatggtggtc
actgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggcattcaatgcc
tacaaggcgcagcgggagaaggaggagaaggaagaggcccggctaagagccaaggaggcc
aagcagaccttgcagcatttcctggagcagcatgaacgcatgacctccaccacccgctac
cggcgggcagaacagacctttggggagctggaggtctgggctgtggtccctgagagggat
cgaaaagaggtttatgatgacgtcctcttcttcctggccaagaaggagaaggaacaggcc
aagcagctgcggcgccgcaacatccaggccctgaagagcatcctagatgggatgagtagt
gtcaacttccaaaccacatggtcccaggcccagcagtacctcatggataaccccagcttt
gctcaggaccatcagctgcagaacatggacaaggaagatgcgctgatctgctttgaggag
catatccgagctttggaaagggaggaggaggaggagcgagagcgagcccgacttcgggag
cggcgccagcagcgcaagaaccgggaggccttccagaccttcctggatgagctgcacgag
acagggcagctgcactccatgtccacctggatggagctgtacccagcggtcagcactgat
atccgctttgccaacatgctgggccagccgggctccacccctctggacttgttcaagttc
tatgtggaggagttgaaggcacgattccatgatgagaagaagatcataaaggacatcctt
aaggaccggggcttctgcgtggaggtgaacacagccttcgaggacttcgcccacgtcata
agctttgacaagagggctgctgcgctggatgcaggcaacatcaagctgactttcaatagt
ctgctagagaaagcagaggcacgtgagagagagcgggagaaggaggaggctcggcggctg
cggcgcagggaggctgccttccgaagcatgctgaggcaggctgtgcctgctgtggagctg
ggcacggcctgggaagaggtccgtgagcgctttgtgtgtgactcagcctttgagcagatc
accctggagtcggagcggatccggctctttcgggagttcctgcaggtactggagacggaa
tgccagcacctccacagcaaaggccggaaacacggcagaaagggcaagaagcaccatcgc
aagcgttcccactcgccttcagtgagttggcggggctctgagtcaggagacgaggagctg
cccccgccctctctccggcccctcaagcggaggcgacggaacccctcggagtctggctct
gagccctcttcctcacttgactctgttgaaagtgggggtgctgcccttggaggacggagt
tccccctcttctcgccttctcctcggatcagatcatggtcttcgaaaagccaagaaacca
aaaaagaaaactaagaagagaagacacaagtcgaatagtcccgagagcgagacagaccct
gaggagagagctgccaaggagagtgatgagaaagaaccagaacaggacatggacagggac
ctccggcgggcagagctccctaaccgctccccagcctttggggtcaagaaggagaagacg
ggctgggacacgtcggaaagcgagctgagtgagggtgagctggaaagacggcggcggacg
ctcttgcagcagctggacgaccaccagtga
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